RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 MTIF3Q9H2K0 278 aaKnown RBP13.28□□□□□ -0.28
SIRPA-203ENST00000400068 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-203ENST00000400068 MTRRQ9UBK8 725 aa13.28□□□□□ -0.28
SIRPA-203ENST00000400068 ADGRE2Q9UHX3 823 aa13.28□□□□□ -0.28
SIRPA-203ENST00000400068 RNF11Q9Y3C5 154 aa13.28□□□□□ -0.28
SIRPA-203ENST00000400068 FAM32AQ9Y421 112 aaKnown RBP13.28□□□□□ -0.28
SIRPA-203ENST00000400068 SAP18O00422 153 aaKnown RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 GRM6O15303 877 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 RNASEH2AO75792 299 aaKnown RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 TUBA1BP68363 451 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 CHIT1Q13231 466 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 DMC1Q14565 340 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 HIST2H2ACQ16777 129 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 TPGS2Q68CL5 300 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 CWF19L1Q69YN2 538 aaKnown RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 HIST2H2AA3Q6FI13 130 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 TUBA1AQ71U36 451 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 RAVER1Q8IY67 606 aaKnown RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 LSMEM2Q8N112 164 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 KLK6Q92876 244 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 OMA1Q96E52 524 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 RERGLQ9H628 205 aa13.27□□□□□ -0.28
SIRPA-203ENST00000400068 MRM3Q9HC36 420 aaKnown RBP13.27□□□□□ -0.28
SIRPA-203ENST00000400068 RFXANKO14593 260 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 ZBTB11O95625 1053 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 EPOP01588 193 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 HLA-EP13747 358 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 NR4A1P22736 598 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 GSTA3Q16772 222 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 DPY19L3Q6ZPD9 716 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 TRAPPC9Q96Q05 1148 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 SLC13A4Q9UKG4 626 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 SNX6Q9UNH7 406 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 CST1P01037 141 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 ATXN1LP0C7T5 689 aaKnown RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 CTSOP43234 321 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 PLEKHG6Q3KR16 790 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 CYP20A1Q6UW02 462 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 GALNT5Q7Z7M9 940 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 GPR180Q86V85 440 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-203ENST00000400068 ADCY4Q8NFM4 1077 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 ARMC7Q9H6L4 198 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 MIEF1Q9NQG6 463 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 SLC22A14Q9Y267 594 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 PRKAB1Q9Y478 270 aa13.27□□□□□ -0.29
SIRPA-203ENST00000400068 PRORSD1PA6NEY8 169 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 MAP3K13O43283 966 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 CLTBP09497 229 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 YAP1P46937 504 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 RFTN1Q14699 578 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 HSF5Q4G112 596 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 GOLGA7Q7Z5G4 137 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 SNX20Q7Z614 316 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 GRASPQ7Z6J2 395 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 SUSD6Q92537 303 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 ZNF419Q96HQ0 510 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 CNOT6Q9ULM6 557 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 TBC1D30Q9Y2I9 924 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 TMEM247A6NEH6 219 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 PABPC1P11940 636 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 CRATP43155 626 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 MAD2L1Q13257 205 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 DGCR6Q14129 220 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 LIN52Q52LA3 116 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 ZNF549Q6P9A3 640 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 BHLHA9Q7RTU4 235 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 PHACTR4Q8IZ21 702 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 ZFYVE19Q96K21 471 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 GSTO2Q9H4Y5 243 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 NUDT4Q9NZJ9 180 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 KRT87PA6NCN2 255 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 LEFTY2O00292 366 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 POP4O95707 220 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 FGBP02675 491 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 GBAP04062 536 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 COL6A1P12109 1028 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 RFX3P48380 749 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 GSK3BP49841 420 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 ADGRG2Q8IZP9 1017 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 BCL7CQ8WUZ0 217 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 RIOK2Q9BVS4 552 aaKnown RBP13.26□□□□□ -0.29
SIRPA-203ENST00000400068 DERL2Q9GZP9 239 aa13.26□□□□□ -0.29
SIRPA-203ENST00000400068 CACYBPQ9HB71 228 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms