RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 AP1S2P56377 157 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ATP6V0D1P61421 351 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CRADDP78560 199 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 BRD3Q15059 726 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CYP2A13Q16696 494 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 DNTTIP2Q5QJE6 756 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 PTRHD1Q6GMV3 140 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 ZNF549Q6P9A3 640 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TMEM26Q6ZUK4 368 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TMPRSS7Q7RTY8 843 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 OR4D9Q8NGE8 314 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 GDAP1Q8TB36 358 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CD200R1Q8TD46 325 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 UBXN4Q92575 508 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TMEM74Q96NL1 305 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 DERL2Q9GZP9 239 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ARFGAP3Q9NP61 516 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 MRPL40Q9NQ50 206 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 OR6C2Q9NZP2 312 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 SLC23A2Q9UGH3 650 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 PRSS21Q9Y6M0 314 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 A0A0U1RQS6 177 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 RIPK2O43353 540 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 DXOO77932 396 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 AHSGP02765 367 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ACP5P13686 325 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 BRAFP15056 766 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CCND1P24385 295 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 HRH2P25021 359 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 GABRB3P28472 473 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CCR7P32248 378 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CDKN1CP49918 316 aaPredicted RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 EIF3BP55884 814 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 TMPRSS15P98073 1019 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TIAL1Q01085 375 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP16-204ENST00000399976 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ZFP36L1Q07352 338 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 SLC5A12Q1EHB4 618 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 HSP90AA5PQ58FG0 334 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ALYREFQ86V81 257 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 KIAA2013Q8IYS2 634 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TCAIMQ8N3R3 496 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 RAB42Q8N4Z0 105 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 OR8K5Q8NH50 307 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 VPS39Q96JC1 886 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 SEC16BQ96JE7 1060 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CCDC77Q9BR77 488 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TRIM31Q9BZY9 425 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 TRIT1Q9H3H1 467 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 IARS2Q9NSE4 1012 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 EURLQ9NYK6 297 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 WASF3Q9UPY6 502 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 VWA7Q9Y334 891 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 PCYT1BQ9Y5K3 369 aaPredicted RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 TDRD6O60522 2096 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 ARHGEF17Q96PE2 2063 aaPredicted RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 CCDC151A5D8V7 595 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 OR51F1A6NGY5 319 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 BUD23O43709 281 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 SH3BP5O60239 455 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 MAP7Q14244 749 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 FASTKD3Q14CZ7 662 aaKnown RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 LGSNQ5TDP6 509 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 LAYNQ6UX15 382 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CHST15Q7LFX5 561 aaPredicted RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 TRIM74Q86UV6 250 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 EID2Q8N6I1 236 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 RHEBL1Q8TAI7 183 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 SLC37A2Q8TED4 501 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ELMO1Q92556 727 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 SLC22A18Q96BI1 424 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 CFAP36Q96G28 342 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 FOPNLQ96NB1 174 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 MENTQ9BUN1 341 aa7.35□□□□□ -1.23
USP16-204ENST00000399976 ZNF624Q9P2J8 865 aaPredicted RBP7.35□□□□□ -1.23
USP16-204ENST00000399976 TMEM8BA6NDV4 472 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 DUX1O43812 170 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 MPOP05164 745 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 GSTA1P08263 222 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 CD82P27701 267 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 PKLRP30613 574 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 CAPZBP47756 277 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SYTL3Q4VX76 610 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 KCTD16Q68DU8 428 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 DOK6Q6PKX4 331 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 FAM83HQ6ZRV2 1179 aaPredicted RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 FAM46DQ8NEK8 389 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 OR2L8Q8NGY9 312 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 IFI44Q8TCB0 444 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 ASB11Q8WXH4 323 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SGF29Q96ES7 293 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 UBXN10Q96LJ8 280 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 PITHD1Q9GZP4 211 aaPredicted RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 PCBD2Q9H0N5 130 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 LRRN3Q9H3W5 708 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SMOC1Q9H4F8 434 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms