RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CDK15Q96Q40 435 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ERVK-6Q9BXR3 956 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ENPP3O14638 875 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 MYCP01106 439 aaPredicted RBP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 PCMT1P22061 227 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 ZNF404Q494X3 552 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 SV2CQ496J9 727 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 UNC93AQ86WB7 457 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 C2CD4AQ8NCU7 369 aaPredicted RBP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 TRIB2Q92519 343 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 TMEM209Q96SK2 561 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 LRRC3Q9BY71 257 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 FAM105AQ9NUU6 356 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 RBM22Q9NW64 420 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 RCOR3Q9P2K3 495 aaPredicted RBP16.82■□□□□ 0.28
PTPRA-205ENST00000399903 FAM50BQ9Y247 325 aa16.82■□□□□ 0.28
PTPRA-205ENST00000399903 HAS3O00219 553 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PFKLP17858 780 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 AZGP1P25311 298 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 IFNA8P32881 189 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 MILR1Q7Z6M3 343 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TMEM179BQ7Z7N9 219 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PROSER1Q86XN7 944 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 EID3Q8N140 333 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 CRYBG2Q8N1P7 616 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TSPAN17Q96FV3 270 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PCED1BQ96HM7 432 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ROGDIQ9GZN7 287 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 NUAK2Q9H093 628 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TKTL2Q9H0I9 626 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 KAT8Q9H7Z6 458 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ERVK13-1Q9NX77 482 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 KRT87PA6NCN2 255 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TSPAN3O60637 253 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ICMTO60725 284 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 B3GAT3O94766 335 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ISL1P61371 349 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 NKG7Q16617 165 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 C17orf99Q6UX52 265 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 BEND5Q7L4P6 421 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 DCP2Q8IU60 420 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PEX5LQ8IYB4 626 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 UBE2J2Q8N2K1 259 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 CDYL2Q8N8U2 506 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 SLIRPQ9GZT3 109 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 RPRD1BQ9NQG5 326 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 AAR2Q9Y312 384 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 KCTD3Q9Y597 815 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ANGPTL3Q9Y5C1 460 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 M0QZ92 97 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 MEN1O00255 615 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 RGS5O15539 181 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 AIREO43918 545 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 CRYZL1O95825 349 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PIRTP0C851 137 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 NPR3P17342 541 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 OTUD1Q5VV17 481 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 LYPD8Q6UX82 237 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 LRRC8DQ7L1W4 858 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 GDPD3Q7L5L3 318 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 IFNL1Q8IU54 200 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TNIP3Q96KP6 325 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 CEP19Q96LK0 163 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 TNKS2Q9H2K2 1166 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 WDCPQ9H6R7 721 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 SP140LQ9H930 580 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 NECTIN3Q9NQS3 549 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 MAGEL2Q9UJ55 1249 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 EIF3LQ9Y262 564 aaKnown RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 PCDHGA10Q9Y5H3 936 aa16.81■□□□□ 0.28
PTPRA-205ENST00000399903 NUP214P35658 2090 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-205ENST00000399903 ITGB1P05556 798 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 MASP1P48740 699 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ATP4BP51164 291 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 TP53BP2Q13625 1128 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 IRAK1BP1Q5VVH5 260 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 NLGN4XQ8N0W4 816 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 GIPC2Q8TF65 315 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 RBM4BQ9BQ04 359 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 RBM4Q9BWF3 364 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 DERAQ9Y315 318 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 TPRKBQ9Y3C4 175 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 PCDHB14Q9Y5E9 798 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 FAM172BPA6NC97 362 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ARL5CA6NH57 179 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 CCDC159P0C7I6 412 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 POLD2P49005 469 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 FLT3LGP49771 235 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 EEFSECP57772 596 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 TOP3AQ13472 1001 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 NXNL2Q5VZ03 156 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ELMOD2Q8IZ81 293 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 TMEM199Q8N511 208 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 OR2T12Q8NG77 320 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms