RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CROCCP3Q8IVE0 287 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 SLC34A3Q8N130 599 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 HDDC3Q8N4P3 179 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZNF557Q8N988 423 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 SLAIN1Q8ND83 568 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 OR13C4Q8NGS5 318 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 SMG9Q9H0W8 520 aaKnown RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZDHHC18Q9NUE0 388 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 MIOSQ9NXC5 875 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 ZMYND8Q9ULU4 1186 aaPredicted RBP3.22□□□□□ -1.89
KNL1-202ENST00000399668 CPQQ9Y646 472 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 COLEC10Q9Y6Z7 277 aa3.22□□□□□ -1.89
KNL1-202ENST00000399668 A0A0D9SEW6 157 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 URADA6NGE7 173 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 CACNB4O00305 520 aaPredicted RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 LIN7AO14910 233 aaPredicted RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 TFECO14948 347 aaPredicted RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 NOBOXO60393 691 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 SEC24AO95486 1093 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 CYP3A5P20815 502 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 NT5EP21589 574 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 NSG1P42857 185 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 GLUD2P49448 558 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 UGT2B15P54855 530 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 YBEYP58557 167 aaPredicted RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 ECT2LQ008S8 904 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 PPP1R8Q12972 351 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 LSM12Q3MHD2 195 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 CHST9Q7L1S5 443 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 HIPK1Q86Z02 1210 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 ARMC8Q8IUR7 673 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 PGAM4Q8N0Y7 254 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 GLIS1Q8NBF1 620 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 OR10Q1Q8NGQ4 319 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 SLC9A6Q92581 669 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 GTPBP3Q969Y2 492 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 EXOSC8Q96B26 276 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 AIF1LQ9BQI0 150 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 MCMBPQ9BTE3 642 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 TRMOQ9BU70 441 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 SPATA5L1Q9BVQ7 753 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 FNDC11Q9BVV2 318 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 NOL6Q9H6R4 1146 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 CCSER2Q9H7U1 834 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 EHD3Q9NZN3 535 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 RSL24D1Q9UHA3 163 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 TMA7Q9Y2S6 64 aaKnown RBP3.21□□□□□ -1.89
KNL1-202ENST00000399668 STON1Q9Y6Q2 735 aa3.21□□□□□ -1.89
KNL1-202ENST00000399668 CPSF4LA6NMK7 179 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 TMEM233B4DJY2 109 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 FZD9O00144 591 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PDLIM1O00151 329 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ASNA1O43681 348 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 MTX2O75431 263 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 TMEM63AO94886 807 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 OR4F21O95013 312 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ALPIP09923 528 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PAX3P23760 479 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 IGFBP5P24593 272 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 RPL10P27635 214 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 CSKP41240 450 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 KIR3DL1P43629 444 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PGGT1BP53609 377 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PURAQ00577 322 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 NFKB2Q00653 900 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 IL10RBQ08334 325 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 LDLRAP1Q5SW96 308 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ATG14Q6ZNE5 492 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 AMER2Q8N7J2 671 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 FAM81AQ8TBF8 368 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 TEX47Q8TBZ9 253 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 SLC35F5Q8WV83 523 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ARMC5Q96C12 935 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 TLCD1Q96CP7 247 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 FAIM2Q9BWQ8 316 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 GPR88Q9GZN0 384 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 MAGEH1Q9H213 219 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 SEMA3GQ9NS98 782 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ANKRD66B4E2M5 251 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 hCG_2039718K7EN88 272 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 AP3D1O14617 1153 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PER2O15055 1255 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 LDB2O43679 373 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 SERPINB7O75635 380 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 C22orf31O95567 290 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 POP4O95707 220 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 FADS2O95864 444 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 UQCRBP14927 111 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 ACVRL1P37023 503 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 RPL3P39023 403 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 PTPN9P43378 593 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 MAPKAPK2P49137 400 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 PLA2G16P53816 162 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 SLC20A2Q08357 652 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 NR1D2Q14995 579 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 KHDRBS2Q5VWX1 349 aaKnown RBP3.21□□□□□ -1.9
KNL1-202ENST00000399668 FAM171BQ6P995 826 aa3.21□□□□□ -1.9
KNL1-202ENST00000399668 CERS6Q6ZMG9 384 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms