RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 COLEC10Q9Y6Z7 277 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 TCRBV9S1A1TA0A576 114 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 FAM159BA6NKW6 160 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 ACADLP28330 430 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 PHBP35232 272 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 SKIV2L2P42285 1042 aaKnown RBP17.27■□□□□ 0.36
CTNS-203ENST00000399306 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.36
CTNS-203ENST00000399306 TTLL9Q3SXZ7 439 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 TEX35Q5T0J7 233 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 TMEM26Q6ZUK4 368 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 OTOAQ7RTW8 1153 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 SFTPA2Q8IWL1 248 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 LRRN4CLQ8ND94 238 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 NAT14Q8WUY8 206 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 C9orf72Q96LT7 481 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 RMDN2Q96LZ7 410 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 INSM2Q96T92 566 aaPredicted RBP17.27■□□□□ 0.36
CTNS-203ENST00000399306 SLC38A3Q99624 504 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 MVB12BQ9H7P6 319 aa17.27■□□□□ 0.36
CTNS-203ENST00000399306 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 E5RI56 91 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 C1QAP02745 245 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 ADRB1P08588 477 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 CBSLP0DN79 551 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 MYF5P13349 255 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 ENO3P13929 434 aaPredicted RBP17.26■□□□□ 0.35
CTNS-203ENST00000399306 GABRB3P28472 473 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 CBSP35520 551 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 MAPK9P45984 424 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 CSE1LP55060 971 aaKnown RBP17.26■□□□□ 0.35
CTNS-203ENST00000399306 MPP1Q00013 466 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 BOP1Q14137 746 aaKnown RBP17.26■□□□□ 0.35
CTNS-203ENST00000399306 LRRC8EQ6NSJ5 796 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 ZNF549Q6P9A3 640 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 CNSTQ6PJW8 725 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 NEK10Q6ZWH5 1172 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 TMPRSS7Q7RTY8 843 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 CNPY4Q8N129 248 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 LILRA3Q8N6C8 439 aaPredicted RBP17.26■□□□□ 0.35
CTNS-203ENST00000399306 LKAAEAR1Q8TD35 194 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 C12orf66Q96MD2 445 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 MCMBPQ9BTE3 642 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 ABCG4Q9H172 646 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 LRRN3Q9H3W5 708 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 TAS2R13Q9NYV9 303 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 RABGEF1Q9UJ41 708 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 NFU1Q9UMS0 254 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 DHRS7Q9Y394 339 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 PTPRBP23467 1997 aa17.26■□□□□ 0.35
CTNS-203ENST00000399306 OR52A4PA6NMU1 304 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 IQCF5A8MTL0 148 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 TMX2-CTNND1H3BSU7 103 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 NIPSNAP2O75323 286 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 VPS26AO75436 327 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 RPN2P04844 631 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 CHRM3P20309 590 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 PDHA2P29803 388 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 CLCN7P51798 805 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 INSM1Q01101 510 aaPredicted RBP17.25■□□□□ 0.35
CTNS-203ENST00000399306 HSPA14Q0VDF9 509 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 FAM45BPQ6NSW5 357 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 UNC5DQ6UXZ4 953 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 TRMT10CQ7L0Y3 403 aaKnown RBP17.25■□□□□ 0.35
CTNS-203ENST00000399306 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 FAM45AQ8TCE6 357 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 TFGQ92734 400 aaPredicted RBP17.25■□□□□ 0.35
CTNS-203ENST00000399306 CPNE1Q99829 537 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 RHOJQ9H4E5 214 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 KIR3DX1Q9H7L2 352 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 NINJ2Q9NZG7 142 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 POLG2Q9UHN1 485 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 PSMD13Q9UNM6 376 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 MED16Q9Y2X0 877 aa17.25■□□□□ 0.35
CTNS-203ENST00000399306 TRBV23OR9-2A0A075B6M9 112 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 B4GAT1O43505 415 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 KDM1AO60341 852 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 GP5P40197 560 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 PREPP48147 710 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 KYNUQ16719 465 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 DHRS13Q6UX07 377 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 STRA8Q7Z7C7 330 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 ZC3HC1Q86WB0 502 aaKnown RBP17.24■□□□□ 0.35
CTNS-203ENST00000399306 TBC1D21Q8IYX1 336 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 ZBTB2Q8N680 514 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
CTNS-203ENST00000399306 OR10G6Q8NH81 332 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 INPP5DQ92835 1189 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 GFM1Q96RP9 751 aaKnown RBP17.24■□□□□ 0.35
CTNS-203ENST00000399306 CYTH2Q99418 400 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 RAB33BQ9H082 229 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 CDC42EP4Q9H3Q1 356 aaKnown RBP17.24■□□□□ 0.35
CTNS-203ENST00000399306 IMP3Q9NV31 184 aaKnown RBP17.24■□□□□ 0.35
CTNS-203ENST00000399306 KCNK4Q9NYG8 393 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 WASF3Q9UPY6 502 aa17.24■□□□□ 0.35
CTNS-203ENST00000399306 COL27A1Q8IZC6 1860 aaPredicted RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 A0A1W2PQM1 296 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms