RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ARHGAP22Q7Z5H3 698 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CLEC14AQ86T13 490 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 PDZD3Q86UT5 571 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ZNF761Q86XN6 746 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CARFQ8N187 725 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 OTUD6BQ8N6M0 293 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ACVR1CQ8NER5 493 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 PRR11Q96HE9 360 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CCDC74BQ96LY2 380 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 C16orf45Q96MC5 204 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 EBNA1BP2Q99848 306 aaKnown RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ERP44Q9BS26 406 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ZMYND15Q9H091 742 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ASCL3Q9NQ33 180 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 MARCH4Q9P2E8 410 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 POLG2Q9UHN1 485 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 SLC24A2Q9UI40 661 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 LOXL2Q9Y4K0 774 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 MATN2O00339 956 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 GPC4O75487 556 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 APOA4P06727 396 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 ARL4CP56559 192 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 PLCL1Q15111 1095 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 TMED2Q15363 201 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 HIF1AQ16665 826 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 KCTD19Q17RG1 926 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 SYTL3Q4VX76 610 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 PTRHD1Q6GMV3 140 aaKnown RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 NAT14Q8WUY8 206 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 LPGAT1Q92604 370 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 FCRL3Q96P31 734 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 CD180Q99467 661 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 FAM167BQ9BTA0 163 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 TFB2MQ9H5Q4 396 aaKnown RBP13.93□□□□□ -0.18
HDDC2-202ENST00000398153 LATS2Q9NRM7 1088 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 WHRNQ9P202 907 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 FAM8A1Q9UBU6 413 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 ACSL6Q9UKU0 697 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 COMMD10Q9Y6G5 202 aa13.93□□□□□ -0.18
HDDC2-202ENST00000398153 A0A087WV48 116 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 B4E171 279 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 TAF4O00268 1085 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CAPN5O15484 640 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 RRP8O43159 456 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 SLCO2B1O94956 709 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 TNFSF15O95150 251 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 RPN2P04844 631 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CD82P27701 267 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 AOAHP28039 575 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 ACADLP28330 430 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 PDHA2P29803 388 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CCR7P32248 378 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 TSPAN7P41732 249 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 MAPK9P45984 424 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 ITGA8P53708 1063 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 RAB15P59190 212 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 BOP1Q14137 746 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 FRG1Q14331 258 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 C16orf72Q14CZ0 275 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CYB5D1Q6P9G0 228 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 OOSP2Q86WS3 158 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 TBC1D21Q8IYX1 336 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 SLC22A15Q8IZD6 547 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 ZNF248Q8NDW4 579 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 FERD3LQ96RJ6 166 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 RAB17Q9H0T7 212 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 C20orf96Q9NUD7 363 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 SEMA5BQ9P283 1151 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 KLHL42Q9P2K6 505 aa13.92□□□□□ -0.18
HDDC2-202ENST00000398153 UTP11Q9Y3A2 253 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
HDDC2-202ENST00000398153 UBA6A0AVT1 1052 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-202ENST00000398153 OR5K3A6NET4 321 aa13.91□□□□□ -0.18
HDDC2-202ENST00000398153 SRRM3A6NNA2 597 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-202ENST00000398153 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms