RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ZFATQ9P243 1243 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 GNPTGQ9UJJ9 305 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 VPS9D1Q9Y2B5 631 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 QSOX1O00391 747 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 PIAS1O75925 651 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 FAM153BP0C7A2 387 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 ITGB6P18564 788 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 RPS3P23396 243 aaKnown RBP eCLIP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 TNFRSF8P28908 595 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 FMO4P31512 558 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 ERVPABLB-1P60509 514 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 NFE2L1Q14494 772 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 KYNUQ16719 465 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 FAM153CQ494X1 144 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 CTSL3PQ5NE16 218 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 PTRHD1Q6GMV3 140 aaKnown RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 LRRC69Q6ZNQ3 347 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 FAM83HQ6ZRV2 1179 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 LRRC6Q86X45 466 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 C17orf82Q86X59 251 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 RELL1Q8IUW5 271 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 LINC00615Q96LM1 132 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 CCM2Q9BSQ5 444 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 CDC42EP4Q9H3Q1 356 aaKnown RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 DPEP2Q9H4A9 486 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 TBC1D29Q9UFV1 150 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 PCDHGA8Q9Y5G5 932 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 DNMT3AQ9Y6K1 912 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-203ENST00000398137 RNF215Q9Y6U7 377 aa24.91■■□□□ 1.58
U2AF1-203ENST00000398137 MGAT4DA6NG13 374 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 PRR19A6NJB7 356 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 IQCF5A8MTL0 148 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 CDRT15L2A8MXV6 281 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 D6RAR5 112 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 FTH1P02794 183 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 RPLP0P05388 317 aaKnown RBP24.9■■□□□ 1.58
U2AF1-203ENST00000398137 SEPT7Q16181 437 aaKnown RBP24.9■■□□□ 1.58
U2AF1-203ENST00000398137 ERCC6LQ2NKX8 1250 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 C14orf28Q4W4Y0 310 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 KRT222Q8N1A0 295 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 LILRA3Q8N6C8 439 aaPredicted RBP24.9■■□□□ 1.58
U2AF1-203ENST00000398137 EIF1ADQ8N9N8 165 aaKnown RBP24.9■■□□□ 1.58
U2AF1-203ENST00000398137 OR2L2Q8NH16 312 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 HM13Q8TCT9 377 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 NAF1Q96HR8 494 aaKnown RBP24.9■■□□□ 1.58
U2AF1-203ENST00000398137 LRRN3Q9H3W5 708 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 SYNDIG1Q9H7V2 258 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 SMYD2Q9NRG4 433 aa24.9■■□□□ 1.58
U2AF1-203ENST00000398137 ZFC3H1O60293 1989 aaKnown RBP24.89■■□□□ 1.58
U2AF1-203ENST00000398137 F8W8V4 182 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 SPAG6O75602 509 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 EML2O95834 649 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 GLB1P16278 677 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 STX2P32856 288 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 CLCNKAP51800 687 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 PCBP4P57723 403 aaKnown RBP24.89■■□□□ 1.58
U2AF1-203ENST00000398137 VSNL1P62760 191 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 DMPKQ09013 629 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 CNSTQ6PJW8 725 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 KIAA0408Q6ZU52 694 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 TMPRSS9Q7Z410 1059 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 ZNF248Q8NDW4 579 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 FBF1Q8TES7 1133 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 ZDHHC1Q8WTX9 485 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 BIRC8Q96P09 236 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 PRDM8Q9NQV8 689 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 PSAT1Q9Y617 370 aa24.89■■□□□ 1.58
U2AF1-203ENST00000398137 PIKFYVEQ9Y2I7 2098 aa24.89■■□□□ 1.57
U2AF1-203ENST00000398137 PDZK1P1A8MUH7 402 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 KCNJ13O60928 360 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 HAUS5O94927 633 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 ACSL3O95573 720 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 ESR1P03372 595 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 GABRB3P28472 473 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 LEPRP48357 1165 aaKnown RBP24.88■■□□□ 1.57
U2AF1-203ENST00000398137 MAZP56270 477 aaKnown RBP24.88■■□□□ 1.57
U2AF1-203ENST00000398137 SLMAPQ14BN4 828 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 ZNF658BQ4V348 819 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-203ENST00000398137 XKR5Q6UX68 686 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 OR6C4Q8NGE1 309 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 PATE1Q8WXA2 126 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 ELMO1Q92556 727 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 LIN37Q96GY3 246 aaPredicted RBP24.88■■□□□ 1.57
U2AF1-203ENST00000398137 GFM1Q96RP9 751 aaKnown RBP24.88■■□□□ 1.57
U2AF1-203ENST00000398137 COG4Q9H9E3 785 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 SSUH2Q9Y2M2 353 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 MGAQ8IWI9 3026 aa24.88■■□□□ 1.57
U2AF1-203ENST00000398137 KLHL33A6NCF5 533 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 A6NCN8 305 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 FAM159BA6NKW6 160 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 CXorf49A8MYA2 514 aaPredicted RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 NIPSNAP2O75323 286 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 PKMP14618 531 aaKnown RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 PNLIPP16233 465 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 IDSP22304 550 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 RPL10P27635 214 aaKnown RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 ADARP55265 1226 aaKnown RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 BOP1Q14137 746 aaKnown RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 ZNF449Q6P9G9 518 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 NAPRTQ6XQN6 538 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms