RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 INHBBP09529 407 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GSK3BP49841 420 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ITGA1P56199 1179 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CDC42P60953 191 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ADARB1P78563 741 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SOX4Q06945 474 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC9A5Q14940 896 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 WSCD1Q658N2 575 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PTRHD1Q6GMV3 140 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 EIF3MQ7L2H7 374 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 EPHX4Q8IUS5 362 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HID1Q8IV36 788 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CCDC28AQ8IWP9 274 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PHC2Q8IXK0 858 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CANT1Q8WVQ1 401 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TMIGD2Q96BF3 282 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 AURKBQ96GD4 344 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GLT1D1Q96MS3 346 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NODALQ96S42 347 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 IGSF5Q9NSI5 407 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TMCC3Q9ULS5 477 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ISPDA4D126 451 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 OR6C75A6NL08 312 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CA12O43570 354 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RGS10O43665 173 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 VPS26AO75436 327 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 EEDO75530 441 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PEX11BO96011 259 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 F7P08709 466 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CHI3L1P36222 383 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GTF2A2P52657 109 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PITX1P78337 314 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 LGALS3BPQ08380 585 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RNASE12Q5GAN4 147 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 OR56A4Q8NGH8 313 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 VMP1Q96GC9 406 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GFM1Q96RP9 751 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF347Q96SE7 839 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 OSMRQ99650 979 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 REEP1Q9H902 201 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC17A6Q9P2U8 582 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 F8W810 466 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CD3EAPO15446 510 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SEC22BO75396 215 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ABCB1P08183 1280 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NR4A2P43354 598 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RELAQ04206 551 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TWF2Q6IBS0 349 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ESRP1Q6NXG1 681 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 FAM117BQ6P1L5 589 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 IL27RAQ6UWB1 636 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 AHSA2Q719I0 299 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RALGPS2Q86X27 583 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 THEM5Q8N1Q8 247 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HMGCLL1Q8TB92 370 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 BPIFB1Q8TDL5 484 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PPP3R2Q96LZ3 170 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM248Q9NWD8 314 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 IFT80Q9P2H3 777 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GPR32O75388 356 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 FTH1P02794 183 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NMBRP28336 390 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC9A3P48764 834 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ATP12AP54707 1039 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PURAQ00577 322 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RAB39AQ14964 217 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF678Q5SXM1 525 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HECTD2Q5U5R9 776 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 FBXL19Q6PCT2 694 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GCNT7Q6ZNI0 430 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 METTL3Q86U44 580 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ELMOD1Q8N336 334 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ATP6V0D2Q8N8Y2 350 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 LSM14AQ8ND56 463 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CHPT1Q8WUD6 406 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SUSD3Q96L08 255 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PKMYT1Q99640 499 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC29A1Q99808 456 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF717Q9BY31 904 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SYNDIG1Q9H7V2 258 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PDGFCQ9NRA1 345 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NEU3Q9UQ49 428 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 A0A0U1RQF3 1178 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TNFRSF10BO14763 440 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CLIC3O95833 236 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TOP3BO95985 862 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 LMO2P25791 158 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 FEN1P39748 380 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PSEN2P49810 448 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 EMX2Q04743 252 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 DAG1Q14118 895 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CNSTQ6PJW8 725 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 DPP9Q86TI2 863 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 OR13J1Q8NGT2 312 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PCED1BQ96HM7 432 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 AARSD1Q9BTE6 412 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms