RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SPDYE1Q8NFV5 336 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-204ENST00000397443 RHEBL1Q8TAI7 183 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 LRRC8CQ8TDW0 803 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 DLG3Q92796 817 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 FAM126AQ9BYI3 521 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-204ENST00000397443 MID2Q9UJV3 735 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 ATXN2Q99700 1313 aaKnown RBP20.75■□□□□ 0.91
CPNE1-204ENST00000397443 KRT87PA6NCN2 255 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 TCP11X1B4DZS4 312 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 LIN7AO14910 233 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-204ENST00000397443 GPR37L1O60883 481 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 RASGRP1O95267 797 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 GUCA1CO95843 209 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 WNT1P04628 370 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 GFAPP14136 432 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 TAC1P20366 129 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 SRP54P61011 504 aaKnown RBP20.74■□□□□ 0.91
CPNE1-204ENST00000397443 PHKG1Q16816 387 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 PFKFB4Q16877 469 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 SBSNQ6UWP8 590 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 LPCAT2Q7L5N7 544 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 RDH11Q8TC12 318 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 ZNF75CPQ92670 426 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-204ENST00000397443 GLMNQ92990 594 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 MAGEB18Q96M61 343 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 OR2M4Q96R27 311 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 MANSC1Q9H8J5 431 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 RMI1Q9H9A7 625 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 TM9SF3Q9HD45 589 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 CIDEBQ9UHD4 219 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 C17orf113A0A1B0GUU1 675 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 A8MT66 165 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 BIRC5O15392 142 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 CD38P28907 300 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 DHPSP49366 369 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-204ENST00000397443 HK3P52790 923 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 SEC24CP53992 1094 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 ALG11Q2TAA5 492 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 UBE2R2Q712K3 238 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-204ENST00000397443 ADAMTSL2Q86TH1 951 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 SLC22A15Q8IZD6 547 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 OXSMQ9NWU1 459 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 CD274Q9NZQ7 290 aa20.74■□□□□ 0.91
CPNE1-204ENST00000397443 TDRD6O60522 2096 aaKnown RBP20.73■□□□□ 0.91
CPNE1-204ENST00000397443 SMIM24O75264 130 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 ITPKAP23677 461 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 ATP5F1P24539 256 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-204ENST00000397443 TGFBIQ15582 683 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 CES4AQ5XG92 561 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 MBOAT1Q6ZNC8 495 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 FAM47EQ6ZV65 393 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 OXR1Q8N573 874 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 FAM107BQ9H098 131 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 DUSP15Q9H1R2 295 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-204ENST00000397443 NCKIPSDQ9NZQ3 722 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 SIRPGQ9P1W8 387 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 CFAP20Q9Y6A4 193 aaKnown RBP20.73■□□□□ 0.91
CPNE1-204ENST00000397443 VPS13AQ96RL7 3174 aa20.73■□□□□ 0.91
CPNE1-204ENST00000397443 EIF3FO00303 357 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 SNX2O60749 519 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 VIMP08670 466 aaKnown RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 TPBGLP0DKB5 382 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 MPC1LP0DKB6 136 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 FGF3P11487 239 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 MTHFD2P13995 350 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 VCLP18206 1134 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 RACK1P63244 317 aaKnown RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 PTK2BQ14289 1009 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 PTGR2Q8N8N7 351 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 CCL4L1Q8NHW4 92 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 ASB11Q8WXH4 323 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 SCARF2Q96GP6 870 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 TMEM168Q9H0V1 697 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 TCEAL2Q9H3H9 227 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 ST14Q9Y5Y6 855 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 DNMT3AQ9Y6K1 912 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 SPTY2D1-AS1A0A0U1RR47 76 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 SYCE1LA8MT33 242 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 GSTM1P09488 218 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 AK4P27144 223 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 AVPR2P30518 371 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 GSTM4Q03013 218 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 FZD2Q14332 565 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 PPP1R3AQ16821 1122 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 RPS27LQ71UM5 84 aaKnown RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 FBXO39Q8N4B4 442 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 GAB3Q8WWW8 586 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 EGFL8Q99944 293 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 ZNF395Q9H8N7 513 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-204ENST00000397443 SLCO1B3Q9NPD5 702 aa20.72■□□□□ 0.91
CPNE1-204ENST00000397443 TOR1BO14657 336 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 HRO43593 1189 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 TRIM13O60858 407 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 BDKRB1P46663 353 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 CSNK1EP49674 416 aaKnown RBP20.71■□□□□ 0.91
CPNE1-204ENST00000397443 CLCNKAP51800 687 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 NAGLUP54802 743 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 SF3A3Q12874 501 aaKnown RBP eCLIP20.71■□□□□ 0.913e-8■■■□□ 16.9
CPNE1-204ENST00000397443 EIF2B5Q13144 721 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms