RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ANKRD12Q6UB98 2062 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 C17orf113A0A1B0GUU1 675 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC5A10A0PJK1 596 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 TARM1B6A8C7 271 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 KMOO15229 486 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 POP7O75817 140 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 KCNK5O95279 499 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 TFEBP19484 476 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 RABIFP47224 123 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 RGS4P49798 205 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 HSPA14Q0VDF9 509 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 SEPT7Q16181 437 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 KLC3Q6P597 504 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC23A3Q6PIS1 610 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 CYHR1Q6ZMK1 362 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 Q6ZSR6 202 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 VRK3Q8IV63 474 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 LILRA3Q8N6C8 439 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 OR56A4Q8NGH8 313 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 OR2L2Q8NH16 312 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 ASZ1Q8WWH4 475 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 SCYL1Q96KG9 808 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC6A18Q96N87 628 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 CNTNAP3BQ96NU0 1288 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 CNTNAP3Q9BZ76 1288 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 CAPN10Q9HC96 672 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 EIF2B4Q9UI10 523 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 PRKAB1Q9Y478 270 aa16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 DNMT3AQ9Y6K1 912 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-205ENST00000397406 PRSS38A1L453 326 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MGAT4DA6NG13 374 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MEI4A8MW99 385 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 TK2O00142 265 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 SLCO2B1O94956 709 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 APOA4P06727 396 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 ENO3P13929 434 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 ENGP17813 658 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 KELP23276 732 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MAOBP27338 520 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MDH1P40925 334 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 OR4D1Q15615 310 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 PYCR3Q53H96 274 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 HHATQ5VTY9 493 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 PIWIL4Q7Z3Z4 852 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC22A18ASQ8N1D0 253 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 OR2I1PQ8NGU4 316 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 C1orf216Q8TAB5 229 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 FAM174AQ8TBP5 190 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 HM13Q8TCT9 377 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 GLMNQ92990 594 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 KIAA1191Q96A73 305 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MRPL57Q9BQC6 102 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MRPL46Q9H2W6 279 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 MRPL40Q9NQ50 206 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 TM7SF3Q9NS93 570 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC23A2Q9UGH3 650 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 GON4LQ3T8J9 2241 aa16.6■□□□□ 0.25
TSPAN4-205ENST00000397406 A0A1W2PR77 199 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 G3V2L1 256 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 CDC7O00311 574 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 TNFRSF10CO14798 259 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 LIN7AO14910 233 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 RBP1P09455 135 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 HTR1BP28222 390 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 KCNC1P48547 511 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 SERPINB4P48594 390 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 THOP1P52888 689 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 GUCY1A3Q02108 690 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 SYTL3Q4VX76 610 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 ENPP7Q6UWV6 458 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 NEK10Q6ZWH5 1172 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 DNASE2BQ8WZ79 361 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 OR1E3Q8WZA6 343 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 PDXPQ96GD0 296 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 PAIP2Q9BPZ3 127 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 ALG9Q9H6U8 611 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 COG4Q9H9E3 785 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 TMEM9BQ9NQ34 198 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 CPSF2Q9P2I0 782 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 FAM8A1Q9UBU6 413 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 ZNHIT2Q9UHR6 403 aa16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 TSR3Q9UJK0 312 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 PNMA8BQ9ULN7 279 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-205ENST00000397406 PCDH15Q96QU1 1955 aa16.58■□□□□ 0.25
TSPAN4-205ENST00000397406 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 CCDC189A1A4V9 331 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 KLHL33A6NCF5 533 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 NPEPPSL1A6NEC2 478 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 BTN3A1O00481 513 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 WNT1P04628 370 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 THEGLP0DJG4 465 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 KCNA4P22459 653 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms