RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZDHHC2Q9UIJ5 367 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 ABCA7Q8IZY2 2146 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 AGAP14A8MT82 685 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 PRAMEF26H0Y7S4 382 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 INPP4BO15327 924 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 GALR2O43603 387 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 IPO13O94829 963 aaKnown RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 ZNF37AP17032 561 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 TEAD1P28347 426 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 CPOXP36551 454 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 CCR10P46092 362 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 SRSF5Q13243 272 aaKnown RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 CFAP157Q5JU67 520 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 ISCA2Q86U28 154 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 PIM3Q86V86 326 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 HEATR4Q86WZ0 1026 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 PHYKPLQ8IUZ5 450 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 ARHGAP24Q8N264 748 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 ENDOVQ8N8Q3 282 aaKnown RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 L3HYPDHQ96EM0 354 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 DUSP15Q9H1R2 295 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-207ENST00000397200 WDR26Q9H7D7 661 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 TCF7L2Q9NQB0 619 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 VPS9D1Q9Y2B5 631 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 MED16Q9Y2X0 877 aa14.66□□□□□ -0.06
CAPN3-207ENST00000397200 B2RBV5 119 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 F8W8V4 182 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 SLC22A2O15244 555 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 NDUFS3O75489 264 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 SLC25A14O95258 325 aaPredicted RBP14.65□□□□□ -0.06
CAPN3-207ENST00000397200 SLC34A2O95436 690 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 CD1DP15813 335 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 TFEBP19484 476 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 CD27P26842 260 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 CNR2P34972 360 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 CA5AP35218 305 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 LDLRAP1Q5SW96 308 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 GPRC6AQ5T6X5 926 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 WLSQ5T9L3 541 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 FBXO27Q8NI29 283 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 RHEBL1Q8TAI7 183 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 MOCOSQ96EN8 888 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 HIC2Q96JB3 615 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 OR52B2Q96RD2 323 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 COPS8Q99627 209 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 TRMOQ9BU70 441 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 RNPEPL1Q9HAU8 725 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 PHPT1Q9NRX4 125 aaPredicted RBP14.65□□□□□ -0.06
CAPN3-207ENST00000397200 ZDHHC3Q9NYG2 299 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 TMPRSS11EQ9UL52 423 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 CRYL1Q9Y2S2 319 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 HS3ST3A1Q9Y663 406 aa14.65□□□□□ -0.06
CAPN3-207ENST00000397200 NEMP2A6NFY4 417 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 HRO43593 1189 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 ZBTB14O43829 449 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 ADSLP30566 484 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 AKT1P31749 480 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 TRIM23P36406 574 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CPA2P48052 419 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 MNAT1P51948 309 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CLDN2P57739 230 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CDK3Q00526 305 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 NAA25Q14CX7 972 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 WDR45BQ5MNZ6 344 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 SWT1Q5T5J6 900 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 FRMD7Q6ZUT3 714 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CEP68Q76N32 757 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 ARMCX6Q7L4S7 300 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 KIRREL3Q8IZU9 778 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 RBFAQ8N0V3 343 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CPSF7Q8N684 471 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM145Q8NBT3 493 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 DDHD1Q8NEL9 900 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 MCUR1Q96AQ8 359 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 PTERQ96BW5 349 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 DCUN1D1Q96GG9 259 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 ORAI3Q9BRQ5 295 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 TEX101Q9BY14 249 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 UNKQ9C0B0 810 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 EIF2B4Q9UI10 523 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CNOT6Q9ULM6 557 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 CA5BQ9Y2D0 317 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 OR1A2Q9Y585 309 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 PCDHGA2Q9Y5H1 932 aa14.64□□□□□ -0.07
CAPN3-207ENST00000397200 OAS3Q9Y6K5 1087 aaKnown RBP14.64□□□□□ -0.07
CAPN3-207ENST00000397200 UBA6A0AVT1 1052 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 POM121BA6NF01 834 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CFAP99D6REC4 459 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF7P17097 686 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 MSH3P20585 1137 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 PTGER3P43115 390 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ADARP55265 1226 aaKnown RBP14.63□□□□□ -0.07
CAPN3-207ENST00000397200 PMS2CLQ68D20 193 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 GCNT7Q6ZNI0 430 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 TRIM74Q86UV6 250 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 RGL4Q8IZJ4 473 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 ZBTB44Q8NCP5 570 aa14.63□□□□□ -0.07
CAPN3-207ENST00000397200 CMTM5Q96DZ9 223 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms