RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 SIRPB2Q5JXA9 342 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DESI1Q6ICB0 168 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 PTRH1Q86Y79 214 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 EID3Q8N140 333 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ATL1Q8WXF7 558 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MTFMTQ96DP5 389 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF641Q96N77 438 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 OSBPL10Q9BXB5 764 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 UGT2B28Q9BY64 529 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DSN1Q9H410 356 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 SP110Q9HB58 689 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ZBTB20Q9HC78 741 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 C8orf4Q9NR00 106 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MCM3APO60318 1980 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CASTOR2A6NHX0 329 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 RFPL2O75678 378 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 FGF4P08620 206 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MZF1P28698 734 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 RPL34P49207 117 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 IFITM2Q01629 132 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 FAM214AQ32MH5 1076 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MARC1Q5VT66 337 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 IRAK1BP1Q5VVH5 260 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 LRRC8DQ7L1W4 858 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 PAPD5Q8NDF8 572 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 TMEM209Q96SK2 561 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 GPR21Q99679 349 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 IKZF5Q9H5V7 419 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 RNF167Q9H6Y7 350 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 RMND5AQ9H871 391 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 AGO3Q9H9G7 860 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DNAJB9Q9UBS3 223 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 KLHL3Q9UH77 587 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 C3orf18Q9UK00 162 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 INTS6Q9UL03 887 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 PCDHB14Q9Y5E9 798 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 EFCAB9A8MZ26 197 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 KCNK2O95069 426 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 PRSS23O95084 383 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 GUCA1CO95843 209 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 MYL3P08590 195 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ENO2P09104 434 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 HAPLN1P10915 354 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 MYCLP1P12525 358 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CDKN1CP49918 316 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 RACK1P63244 317 aaKnown RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SCAPQ12770 1279 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 IHHQ14623 411 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CLCA4Q14CN2 919 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 STEAP3Q658P3 488 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SPATA19Q7Z5L4 167 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ANKRD46Q86W74 232 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CIR1Q86X95 450 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CELF2-AS1Q8N7Q2 184 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 STAG3L4Q8TBR4 150 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF486Q96H40 463 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 RBM4BQ9BQ04 359 aaKnown RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 PSD2Q9BQI7 771 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 RBM4Q9BWF3 364 aaKnown RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 NACA2Q9H009 215 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CNGB3Q9NQW8 809 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SCN3BQ9NY72 215 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF639Q9UID6 485 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SNX8Q9Y5X2 465 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 FAM234BA2RU67 622 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ANKRD34BA5PLL1 514 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SLC22A1O15245 554 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 IDH3BO43837 385 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CYP7B1O75881 506 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CAPN1P07384 714 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 HSMCR30P0CW71 290 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 PCMT1P22061 227 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 EPHA2P29317 976 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 DCTP40126 519 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 FOXM1Q08050 763 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 TRAF3Q13114 568 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 AP5B1Q2VPB7 878 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 LRIT3Q3SXY7 679 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 BEND5Q7L4P6 421 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 SIX5Q8N196 739 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 GOLM1Q8NBJ4 401 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 TMEM40Q8WWA1 233 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 PSMG2Q969U7 264 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ZFYVE19Q96K21 471 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF583Q96ND8 569 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 ROGDIQ9GZN7 287 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 CATSPERBQ9H7T0 1116 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 TRMT13Q9NUP7 481 aaKnown RBP9.68□□□□□ -0.86
TRIM39-203ENST00000396547 TBC1D14Q9P2M4 693 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 GMPPBQ9Y5P6 360 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 TTC3P53804 2025 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 MICAL3Q7RTP6 2002 aa9.68□□□□□ -0.86
TRIM39-203ENST00000396547 FAM92AA1XBS5 289 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms