RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 KLHL4Q9C0H6 718 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 MTG2Q9H4K7 406 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 HEBP1Q9NRV9 189 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TMEM45AQ9NWC5 275 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 GID8Q9NWU2 228 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TRPS1Q9UHF7 1281 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 PABPN1LA6NDY0 278 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 PRORSD1PA6NEY8 169 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 C9JVG2 144 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 LIN7AO14910 233 aaPredicted RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 KPNA5O15131 536 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 AP2A2O94973 939 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 NFATC1O95644 943 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 MSH3P20585 1137 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 MMP12P39900 470 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 ATXN3P54252 364 aaPredicted RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 CDKL1Q00532 357 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SP140Q13342 867 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 BOP1Q14137 746 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 ZNF284Q2VY69 593 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 IRGCQ6NXR0 463 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TTC23LQ6PF05 361 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 RNF165Q6ZSG1 346 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 Q6ZVL8 140 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 UBE2R2Q712K3 238 aaPredicted RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 SPATA24Q86W54 205 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 HOMEZQ8IX15 550 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TCAIMQ8N3R3 496 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SFRP1Q8N474 314 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 DDHD1Q8NEL9 900 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SCAMP4Q969E2 229 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TIFAQ96CG3 184 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 GPATCH1Q9BRR8 931 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 SLC39A3Q9BRY0 314 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 ZSCAN5AQ9BUG6 496 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TRIM54Q9BYV2 358 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 CD300AQ9UGN4 299 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SUN2Q9UH99 717 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 A0A1W2PP18 115 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 C16orf96A6NNT2 1141 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 TULP3O75386 442 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 STK16O75716 305 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 SLC22A3O75751 556 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 WDR47O94967 919 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 STAMBPO95630 424 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 C8BP07358 591 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 EPB42P16452 691 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 ETV3P41162 512 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 VIPR2P41587 438 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 HSPA14Q0VDF9 509 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 HENMT1Q5T8I9 393 aaKnown RBP14.66□□□□□ -0.06
CBX3-202ENST00000396386 LPCAT4Q643R3 524 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 ERAP2Q6P179 960 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 MBOAT1Q6ZNC8 495 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 Q6ZSR9 355 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 PDSS2Q86YH6 399 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 MINDY1Q8N5J2 469 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 C12orf76Q8N812 135 aaPredicted RBP14.66□□□□□ -0.06
CBX3-202ENST00000396386 BPIFB1Q8TDL5 484 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 PPP3R2Q96LZ3 170 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 NTMT1Q9BV86 223 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 ARL15Q9NXU5 204 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 MAP10Q9P2G4 905 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 ABCD2Q9UBJ2 740 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 PDE10AQ9Y233 779 aa14.66□□□□□ -0.06
CBX3-202ENST00000396386 FAM234BA2RU67 622 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 GRXCR1A8MXD5 290 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 FXYD1O00168 92 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 QSOX1O00391 747 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 LSM1O15116 133 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 EEDO75530 441 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 FTH1P02794 183 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 EBLN1P0CF75 366 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 GDF5P43026 501 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 RPIAP49247 311 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 POLR2JP52435 117 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 EMX2Q04743 252 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 KLC1Q07866 573 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ADGRE1Q14246 886 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 RARS2Q5T160 578 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 TMC5Q6UXY8 1006 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 PARS2Q7L3T8 475 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 LRRC70Q7Z2Q7 622 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 TMEM126BQ8IUX1 230 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 NPAS3Q8IXF0 933 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ETFBKMTQ8IXQ9 262 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ZNF366Q8N895 744 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SKA2Q8WVK7 121 aaPredicted RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC45A3Q96JT2 553 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 LRGUKQ96M69 825 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 RIOK2Q9BVS4 552 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC12A9Q9BXP2 914 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC29A3Q9BZD2 475 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SFXN1Q9H9B4 322 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 IL1RL2Q9HB29 575 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 PARVBQ9HBI1 364 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC52A3Q9NQ40 469 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 LEF1Q9UJU2 399 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms