RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RALGPS1Q5JS13 557 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CLEC6AQ6EIG7 209 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GK5Q6ZS86 529 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FAM124AQ86V42 546 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 STX12Q86Y82 276 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 LCN9Q8WX39 176 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PIK3R3Q92569 461 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHB18PQ96TA0 734 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 IL36AQ9UHA7 158 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RIPK3Q9Y572 518 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ROBO1Q9Y6N7 1651 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SRPRAP08240 638 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MPSTP25325 297 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CCR10P46092 362 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SP2Q02086 613 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GALNT5Q7Z7M9 940 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLCO6A1Q86UG4 719 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 WFIKKN2Q8TEU8 576 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GIPC3Q8TF64 312 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CAPSLQ8WWF8 208 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RNF31Q96EP0 1072 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC4A9Q96Q91 983 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MRPS30Q9NP92 439 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NME6O75414 186 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GATBO75879 557 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SCELO95171 688 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 AQP1P29972 269 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SCNN1AP37088 669 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CCR8P51685 355 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 HERVK_113P63132 956 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 DSC2Q02487 901 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RBBP4Q09028 425 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CHIT1Q13231 466 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 COX18Q8N8Q8 333 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ATAD1Q8NBU5 361 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ERVK-6Q9BXR3 956 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 COQ4Q9Y3A0 265 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 LGR5O75473 907 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TCEA3O75764 348 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FADS2O95864 444 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CD2P06729 351 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NMBRP28336 390 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 AP1S2P56377 157 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ECT2LQ008S8 904 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 HSF2Q03933 536 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 LIPEQ05469 1076 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PLEKHG6Q3KR16 790 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GPR33Q49SQ1 333 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 IRF2BP1Q8IU81 584 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF781Q8N8C0 355 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C15orf40Q8WUR7 153 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 LMLNQ96KR4 655 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NODALQ96S42 347 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TMED5Q9Y3A6 229 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TIMM22Q9Y584 194 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NUP188Q5SRE5 1749 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 B3GALT2O43825 422 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 HCN1O60741 890 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PPP1R11O60927 126 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FAM155BO75949 473 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PAPSS2O95340 614 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 METTL18O95568 372 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GSTT2BP0CG30 244 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF33AQ06730 810 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC13A2Q13183 592 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FAM189A2Q15884 450 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MINDY4Q4G0A6 757 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 BRAT1Q6PJG6 821 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GALNT7Q86SF2 657 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RASGEF1AQ8N9B8 481 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NTAN1Q96AB6 310 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MYOCQ99972 504 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 KCNS3Q9BQ31 491 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TNKS2Q9H2K2 1166 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 WDR55Q9H6Y2 383 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SIGLEC1Q9BZZ2 1709 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 WTIPA6NIX2 430 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 UNGP13051 313 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 KCNA5P22460 613 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PAX7P23759 505 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MPP1Q00013 466 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SCN1BQ07699 218 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 BNIP1Q12981 228 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC10A6Q3KNW5 377 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM220Q6QAJ8 160 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PRR23BQ6ZRT6 265 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TSEN15Q8WW01 171 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ACOT12Q8WYK0 555 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 HERVK_113Q902F9 699 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C12orf42Q96LP6 360 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 LRRC3Q9BY71 257 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SRMSQ9H3Y6 488 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C1orf109Q9NX04 203 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC38A8A6NNN8 435 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PITPNM1O00562 1244 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PRAMEF12O95522 483 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MSX2P35548 267 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms