RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 NFKB1P19838 968 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 ME2P23368 584 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 TIE1P35590 1138 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 CASP2P42575 452 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 SERPINB9P50453 376 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 SLC7A2P52569 658 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 NCS1P62166 190 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 POU4F1Q01851 419 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 PIGFQ07326 219 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 TAB1Q15750 504 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 PIGGQ5H8A4 983 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 MARCH8Q5T0T0 291 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
LAMB1-203ENST00000393560 IZUMO3Q5VZ72 239 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 TTC29Q8NA56 475 aaPredicted RBP11.24□□□□□ -0.61
LAMB1-203ENST00000393560 ZSCAN1Q8NBB4 408 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
LAMB1-203ENST00000393560 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
LAMB1-203ENST00000393560 OPN3Q9H1Y3 402 aaPredicted RBP11.24□□□□□ -0.61
LAMB1-203ENST00000393560 ADAMTS10Q9H324 1103 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 ENAMQ9NRM1 1142 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 KIAA1551Q9HCM1 1747 aa11.24□□□□□ -0.61
LAMB1-203ENST00000393560 RNF103-CHMP3A0A140T963 221 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 DFFAO00273 331 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TIPRLO75663 272 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 MT-ND3P03897 115 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ANXA8P13928 327 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 RPS3P23396 243 aaKnown RBP eCLIP11.23□□□□□ -0.611e-7■■■□□ 16.6
LAMB1-203ENST00000393560 ITGB8P26012 769 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 DIO1P49895 249 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TIGD6Q17RP2 521 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ZIK1Q3SY52 487 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ANXA8L1Q5VT79 327 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 FAM171A1Q5VUB5 890 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 SLC25A25Q6KCM7 469 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TIGD7Q6NT04 549 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ATRAIDQ6UW56 229 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 SCIMPQ6UWF3 145 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 PARP16Q8N5Y8 322 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 LPCAT1Q8NF37 534 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CDCA5Q96FF9 252 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 DCLRE1CQ96SD1 692 aaKnown RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 MMP28Q9H239 520 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 BFARQ9NZS9 450 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 GPN3Q9UHW5 284 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 FAM221BA6H8Z2 402 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 EFCAB10A6NFE3 127 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 EML1O00423 815 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CLDN3O15551 220 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CA12O43570 354 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 EDIL3O43854 480 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 NPHS1O60500 1241 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 PEX10O60683 326 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 GGPS1O95749 300 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 IFNB1P01574 187 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 C1QBP02746 253 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 LAP3P28838 519 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 GDI1P31150 447 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 BRCC3P46736 316 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CASP4P49662 377 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 EPHA5P54756 1037 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TSPAN5P62079 268 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 FOXK1P85037 733 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 DSC2Q02487 901 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 SIX1Q15475 284 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TEAD4Q15561 434 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 OR2B11Q5JQS5 317 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ANKS6Q68DC2 871 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 PNCKQ6P2M8 343 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 USP53Q70EK8 1073 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 TCTE3Q8IZS6 198 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CNTD1Q8N815 330 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CHDHQ8NE62 594 aaPredicted RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 ADAMTS19Q8TE59 1207 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
LAMB1-203ENST00000393560 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
LAMB1-203ENST00000393560 MMP19Q99542 508 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms