RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 GRID2O43424 1007 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SH3BGRLO75368 114 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CRTAPO75718 401 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 CYP7B1O75881 506 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ADAP00813 363 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 FGBP02675 491 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 IGFBP1P08833 259 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 DBHP09172 617 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 UMPSP11172 480 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DGKAP23743 735 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MAGEA9P43362 315 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 JAK3P52333 1124 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CACNA2D1P54289 1103 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 PNLIPRP2P54317 469 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TPTEP56180 551 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MTCP1P56278 107 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 BNC1Q01954 994 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GPM6BQ13491 265 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 AARDQ4LEZ3 155 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TWF2Q6IBS0 349 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 TEX38Q6PEX7 206 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 KCTD8Q6ZWB6 473 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 PRSS45Q7RTY3 260 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 VPS36Q86VN1 386 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ZDHHC21Q8IVQ6 265 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ARL5BQ96KC2 179 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 B3GALT6Q96L58 329 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 AMDHD1Q96NU7 426 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DPYSL5Q9BPU6 564 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 KCNS3Q9BQ31 491 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 VKORC1Q9BQB6 163 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DCLRE1BQ9H816 532 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 XPNPEP3Q9NQH7 507 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SLC9A8Q9Y2E8 581 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SH3GLB1Q9Y371 365 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 POLA1P09884 1462 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 A0A1B0GVL5 298 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 C12orf71A8MTZ7 269 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 XRCC3O43542 346 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SELENOFO60613 162 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 STC2O76061 302 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TM7SF2O76062 418 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 PDE9AO76083 593 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MT-CYBP00156 380 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 AGTP01019 485 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 YES1P07947 543 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ASNSP08243 561 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GSTA2P09210 222 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 HMGB2P26583 209 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 ADMP35318 185 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 FDFT1P37268 417 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 FRKP42685 505 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 CDK7P50613 346 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 OSTNP61366 133 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SPIBQ01892 262 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 HSF2Q03933 536 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CRYZQ08257 329 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 TMEM62Q0P6H9 643 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 NONOQ15233 471 aaKnown RBP eCLIP3.49□□□□□ -1.85
XRN1-202ENST00000392981 PRAMEF5Q5TYX0 476 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 PRAMEF6Q5VXH4 476 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 SIGIRRQ6IA17 410 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CCDC137Q6PK04 289 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 PAQR3Q6TCH7 311 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 RYBPQ8N488 228 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 CEP112Q8N8E3 955 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 WDR20Q8TBZ3 569 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GIPC3Q8TF64 312 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
XRN1-202ENST00000392981 ZNF274Q96GC6 653 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 GDF15Q99988 308 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 WRAP53Q9BUR4 548 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 DENND2DQ9H6A0 471 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 TRPC7Q9HCX4 862 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 POLE4Q9NR33 117 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 GCNT4Q9P109 453 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 NLKQ9UBE8 527 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 MFHAS1Q9Y4C4 1052 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CFAP43Q8NDM7 1665 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 KIF21BO75037 1637 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DPPA5A6NC42 116 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TO15178 435 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CLIC2O15247 247 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 TRIM3O75382 744 aaPredicted RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 BAG4O95429 457 aaKnown RBP3.49□□□□□ -1.85
XRN1-202ENST00000392981 ANP32DO95626 131 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 VIPR1P32241 457 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 LBX1P52954 281 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DMPKQ09013 629 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 NME3Q13232 169 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 CARD17Q5XLA6 110 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 C20orf204Q6ZNR8 217 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 DGLUCYQ7Z3D6 616 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 VTCN1Q7Z7D3 282 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 COMTD1Q86VU5 262 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 FAM20CQ8IXL6 584 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ZNF679Q8IYX0 411 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 ARMC10Q8N2F6 343 aa3.49□□□□□ -1.85
XRN1-202ENST00000392981 OR10Q1Q8NGQ4 319 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms