RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PITRM1Q5JRX3 1037 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 TDHQ8IZJ6 230 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 PPHLN1Q8NEY8 458 aaKnown RBP18.71■□□□□ 0.58
CCDC50-202ENST00000392456 BLOC1S5Q8TDH9 187 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 TNKS2Q9H2K2 1166 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 ARL5AQ9Y689 179 aa18.71■□□□□ 0.58
CCDC50-202ENST00000392456 C7orf72A4D263 438 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 OTOL1A6NHN0 477 aaPredicted RBP18.7■□□□□ 0.58
CCDC50-202ENST00000392456 CLDN25C9JDP6 229 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 ERVH48-1M5A8F1 160 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 TK2O00142 265 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 SHOXO15266 292 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 ASNA1O43681 348 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 DYRK3O43781 588 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 PAPLNO95428 1278 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 ICAM2P13598 275 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 BGNP21810 368 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 OPRL1P41146 370 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 PGGT1BP53609 377 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 MESP2Q0VG99 397 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 DGKKQ5KSL6 1271 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC50-202ENST00000392456 TMEM215Q68D42 235 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 PLEKHG7Q6ZR37 379 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 CDHR3Q6ZTQ4 885 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 DENND6AQ8IWF6 608 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 OR13J1Q8NGT2 312 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 PDCD6IPQ8WUM4 868 aaKnown RBP18.7■□□□□ 0.58
CCDC50-202ENST00000392456 MKRN2Q9H000 416 aaKnown RBP18.7■□□□□ 0.58
CCDC50-202ENST00000392456 MAGEE1Q9HCI5 957 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 RAI2Q9Y5P3 530 aa18.7■□□□□ 0.58
CCDC50-202ENST00000392456 LDB2O43679 373 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 PROCP04070 461 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 GRIA3P42263 894 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 ARSDP51689 593 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 DLX2Q07687 328 aaPredicted RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 DUSP7Q16829 419 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SHEQ5VZ18 495 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 KRT80Q6KB66 452 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 NCEH1Q6PIU2 408 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SPNS2Q8IVW8 549 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 CELF5Q8N6W0 485 aaKnown RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 PSD4Q8NDX1 1056 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 FIG4Q92562 907 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 TRIM63Q969Q1 353 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SERHL2Q9H4I8 314 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 WASH6PQ9NQA3 447 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SUCOQ9UBS9 1254 aaKnown RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SLCO3A1Q9UIG8 710 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 H0YJX3 145 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 ZNF26P17031 533 aaPredicted RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 FSHRP23945 695 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 RACK1P63244 317 aaKnown RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 CTBP1Q13363 440 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 IGSF11Q5DX21 431 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 STRA8Q7Z7C7 330 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 CCDC117Q8IWD4 279 aaPredicted RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 VOPP1Q96AW1 172 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 VPS33AQ96AX1 596 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 SH3YL1Q96HL8 342 aaPredicted RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 ASB16Q96NS5 453 aa18.69■□□□□ 0.58
CCDC50-202ENST00000392456 COPS7BQ9H9Q2 264 aaPredicted RBP18.69■□□□□ 0.58
CCDC50-202ENST00000392456 A0A0B4J203 849 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 KRT37O76014 449 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 BCL10O95999 233 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 EPOP01588 193 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 ALDOAP04075 364 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 POLD2P49005 469 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 PMS2P3Q13401 168 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 FIP1L1Q6UN15 594 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 GPR149Q86SP6 731 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 CAMK1DQ8IU85 385 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 FBXL6Q8N531 539 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 SORCS1Q8WY21 1168 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 ZNF597Q96LX8 424 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 FAM111AQ96PZ2 611 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 EVLQ9UI08 416 aaPredicted RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 OR5K3A6NET4 321 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 MROH6A6NGR9 719 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 NDST3O95803 873 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 PLK1P53350 603 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 TMPRSS15P98073 1019 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 RAB39AQ14964 217 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 DHCR24Q15392 516 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 TSTD2Q5T7W7 516 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 RETSATQ6NUM9 610 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 METTL2BQ6P1Q9 378 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 LYPD8Q6UX82 237 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 ADIPOR2Q86V24 386 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 EFCAB3Q8N7B9 438 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 LPCAT1Q8NF37 534 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 OSBPL11Q9BXB4 747 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 NARFLQ9H6Q4 476 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 TCF7L2Q9NQB0 619 aa18.68■□□□□ 0.58
CCDC50-202ENST00000392456 DUS2Q9NX74 493 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 PTBP2Q9UKA9 531 aaKnown RBP18.68■□□□□ 0.58
CCDC50-202ENST00000392456 TMCC3Q9ULS5 477 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms