RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SMRP1Q8NCR6 262 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 BBS10Q8TAM1 723 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 NEUROG1Q92886 237 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 VOPP1Q96AW1 172 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 JAKMIP1Q96N16 626 aaKnown RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 MGME1Q9BQP7 344 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 FAM129AQ9BZQ8 928 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 RAB6CQ9H0N0 254 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 SLA2Q9H6Q3 261 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 FKRPQ9H9S5 495 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 ARGLU1Q9NWB6 273 aaPredicted RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 NPAP1Q9NZP6 1156 aa5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPIN1Q9Y657 262 aaPredicted RBP5.2□□□□□ -1.58
RNU6-40P-201ENST00000384254 HEPACAM2A8MVW5 462 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 CCDC188H7C350 402 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 RAB40ALP0C0E4 278 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 OR52Z1P0C646 297 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 DANCRP0C864 163 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 ITGA2P17301 1181 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 AHRP35869 848 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 TNNT3P45378 269 aaPredicted RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 KRT83P78385 493 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 ACSM1Q08AH1 577 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 CAVIN1Q6NZI2 390 aaKnown RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 FAM198BQ6UWH4 519 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 GFRALQ6UXV0 394 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 RAD9BQ6WBX8 426 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 C11orf57Q6ZUT1 292 aaPredicted RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 ASB18Q6ZVZ8 466 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 MEPCEQ7L2J0 689 aaKnown RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 TMEM219Q86XT9 240 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 MUC20Q8N307 709 aaPredicted RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 GOT1L1Q8NHS2 421 aaPredicted RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 B4GALNT2Q8NHY0 566 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPSB1Q96BD6 273 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 VMP1Q96GC9 406 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 ABHD8Q96I13 439 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 ALDH8A1Q9H2A2 487 aaPredicted RBP5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 PADI2Q9Y2J8 665 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 LIPGQ9Y5X9 500 aa5.19□□□□□ -1.58
RNU6-40P-201ENST00000384254 SAA2-SAA4A0A096LPE2 208 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 MAGEA13PA6NCF6 341 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 ANXA2P2A6NMY6 339 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 TRIM77I1YAP6 450 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 CLDN4O14493 209 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 ATP5BP06576 529 aaKnown RBP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 NGFRP08138 427 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 T-ENOLP0DO92 83 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 CSF2RAP15509 400 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 MCCP23508 829 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 ASCL1P50553 236 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 RPS18P62269 152 aaKnown RBP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 TROAPQ12815 778 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 PPIGQ13427 754 aaKnown RBP eCLIP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 ZNF273Q14593 569 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 KLHL26Q53HC5 615 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 C1QTNF12Q5T7M4 302 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 C11orf88Q6PI97 169 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 TRAT1Q6PIZ9 186 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 MOXD1Q6UVY6 613 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 LONP2Q86WA8 852 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 PTOV1Q86YD1 416 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPATA2LQ8IUW3 424 aaPredicted RBP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 FAM114A1Q8IWE2 563 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 LILRB1Q8NHL6 650 aaPredicted RBP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 DAZLQ92904 295 aaKnown RBP5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 LINGO1Q96FE5 620 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 MED30Q96HR3 178 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 IL25Q9H293 177 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 TRPC7Q9HCX4 862 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 DLGAP4Q9Y2H0 992 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 FLT1P17948 1338 aa5.18□□□□□ -1.58
RNU6-40P-201ENST00000384254 HYKKA2RU49 373 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 CLEC18AA5D8T8 446 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 H0Y626 953 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 LDB3O75112 727 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 PDE9AO76083 593 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 TOMM70O94826 608 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 TFAP2AP05549 437 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 LIPFP07098 398 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 CDH1P12830 882 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 PDGFRAP16234 1089 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 GM2AP17900 193 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 HTR6P50406 440 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 LIMK1P53667 647 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 TPD52P55327 224 aaPredicted RBP5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 PRKCZQ05513 592 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 MZT1Q08AG7 82 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 DUOXA1Q1HG43 343 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 KIF19Q2TAC6 998 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 SFMBT2Q5VUG0 894 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 FAM171BQ6P995 826 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 SUSD1Q6UWL2 747 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 UNQ6126/PRO20091Q6UXV3 157 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 SPATA21Q7Z572 469 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 COMMD2Q86X83 199 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 ZNF611Q8N823 705 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 CLEC18CQ8NCF0 446 aa5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 SYN2Q92777 582 aaPredicted RBP5.17□□□□□ -1.58
RNU6-40P-201ENST00000384254 EXT2Q93063 718 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms