RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZBTB20Q9HC78 741 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ING3Q9NXR8 418 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TRPM5Q9NZQ8 1165 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF639Q9UID6 485 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TNPO3Q9Y5L0 923 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ATP6AP2A0A1C7CYW4 349 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PIPSLA2A3N6 862 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TLR3O15455 904 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TSC22D2O75157 780 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 FCER2P06734 321 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 KCNA5P22460 613 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 HOXC13P31276 330 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 YWHAZP63104 245 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PLD1Q13393 1074 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 GLRA4Q5JXX5 417 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TDRD10Q5VZ19 366 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 REP15Q6BDI9 236 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 CASC4Q6P4E1 433 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MON1BQ7L1V2 547 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RETREG3Q86VR2 466 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 C8orf59Q8N0T1 100 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RDH13Q8NBN7 331 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TXNDC5Q8NBS9 432 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF680Q8NEM1 530 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RORBQ92753 470 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SEMA4DQ92854 862 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MYRFLQ96LU7 910 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TLR6Q9Y2C9 796 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 U3KQV3 271 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 CITO14578 2027 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SMIM35A0A1B0GVV1 85 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SMLR1H3BR10 107 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TPP1O14773 563 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MED26O95402 600 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 CHRNGP07510 517 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PSMA4P25789 261 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 CD6P30203 668 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RFC2P35250 354 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TSPAN7P41732 249 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MAP2K4P45985 399 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RAP1GAPP47736 663 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MEOX2P50222 304 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 NUBP1P53384 320 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PER3P56645 1201 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 HSD17B7P56937 341 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 DGCR6Q14129 220 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TIGD7Q6NT04 549 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TMC8Q8IU68 726 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 LRRC52Q8N7C0 313 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 HMGCLL1Q8TB92 370 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ACTL9Q8TC94 416 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PCNPQ8WW12 178 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 CPA5Q8WXQ8 436 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MOCOSQ96EN8 888 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ELMO2Q96JJ3 720 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SIGLEC10Q96LC7 697 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 NAT9Q9BTE0 207 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 APOL5Q9BWW9 433 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 GTPBP2Q9BX10 602 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MS4A7Q9GZW8 240 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SHARPINQ9H0F6 387 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ERVK13-1Q9NX77 482 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ANAPC2Q9UJX6 822 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 INTS6Q9UL03 887 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 KLHL20Q9Y2M5 609 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHGB1Q9Y5G3 927 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 U3KQ87 197 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 RPS10-NUDT3A0A1W2PQS6 291 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 AQP12BA6NM10 295 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 EFCAB9A8MZ26 197 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ZBTB42B2RXF5 422 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 H0Y626 953 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SLC1A7O00341 560 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 E2F3O00716 465 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ANGPT2O15123 496 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GRID2O43424 1007 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 WDPCPO95876 746 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 HMGCRP04035 888 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CDK1P06493 297 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GNA15P30679 374 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PNPLA4P41247 253 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SLC7A2P52569 658 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ARFIP1P53367 373 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 NOMO3P69849 1222 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 MBTD1Q05BQ5 628 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 INPP5AQ14642 412 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GTDC1Q4AE62 458 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PTPN20Q4JDL3 420 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ANKRD39Q53RE8 183 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TAPT1Q6NXT6 567 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PAMR1Q6UXH9 720 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GPRIN3Q6ZVF9 776 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 NLRP8Q86W28 1048 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 UNC93AQ86WB7 457 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 AQP12AQ8IXF9 295 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms