RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 MFSD13AQ14CX5 517 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 MB21D2Q8IYB1 491 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 NETO2Q8NC67 525 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 FRZBQ92765 325 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 SLC5A5Q92911 643 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 PCDH9Q9HC56 1237 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 ZNF705FA8MVS1 300 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 ZNF705DP0CH99 300 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 ZNF705BP0CI00 300 aaPredicted RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 ZNF3P17036 446 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 PRR5P85299 388 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 GTF2H2Q13888 395 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 GTF2H2CQ6P1K8 395 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 TMPPEQ6ZT21 453 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 STK35Q8TDR2 534 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 MRPL45Q9BRJ2 306 aaKnown RBP13.12□□□□□ -0.31
HIPK3-202ENST00000379016 IL20RAQ9UHF4 553 aa13.12□□□□□ -0.31
HIPK3-202ENST00000379016 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 DAPL1A0PJW8 107 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 OR5H15A6NDH6 313 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 OR5H14A6NHG9 310 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CALCAP01258 141 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CCNB1P14635 433 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 KLRK1P26718 216 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CLEC12AQ5QGZ9 265 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CAPN13Q6MZZ7 669 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 KCNJ9Q92806 393 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 NXNL1Q96CM4 212 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 FEM1AQ9BSK4 669 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 A0A1W2PRQ8 180 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 UNC5CO95185 931 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PKMP14618 531 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 NPTX2P47972 431 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CDK7P50613 346 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 TMEM35AQ53FP2 167 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SDHAF4Q5VUM1 108 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 FAM35AQ86V20 835 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 KIF18BQ86Y91 864 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 YIPF7Q8N8F6 280 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 MTMR9Q96QG7 549 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 NODALQ96S42 347 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 FARSBQ9NSD9 589 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CCNE2O96020 404 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 ADAP00813 363 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 COX4I1P13073 169 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 FASTKD3Q14CZ7 662 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 ATAT1Q5SQI0 421 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 ELMOD2Q8IZ81 293 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PLP2Q04941 152 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 APBB2Q92870 758 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CDT1Q9H211 546 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PHPT1Q9NRX4 125 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SH2B3Q9UQQ2 575 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 LGR5O75473 907 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 EPHX1P07099 455 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 DLSTP36957 453 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 GLP1RP43220 463 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 TATDN2Q93075 761 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SEMA3CQ99985 751 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CCNB1IP1Q9NPC3 277 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 TUBA8Q9NY65 449 aaPredicted RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 TAS2R7Q9NYW3 318 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PLK2Q9NYY3 685 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 WFS1O76024 890 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 RBL1P28749 1068 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CAMK2DQ13557 499 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 DPYSL2Q16555 572 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 KYAT3Q6YP21 454 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 USP51Q70EK9 711 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 PIWIL1Q96J94 861 aaKnown RBP13.11□□□□□ -0.31
HIPK3-202ENST00000379016 HSPA12BQ96MM6 686 aa13.11□□□□□ -0.31
HIPK3-202ENST00000379016 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms