RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 STX2P32856 288 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CLCN7P51798 805 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 INSM1Q01101 510 aaPredicted RBP18.31■□□□□ 0.52
SSU72-203ENST00000378725 HSPA14Q0VDF9 509 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 SQSTM1Q13501 440 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 GBX1Q14549 363 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 SLMAPQ14BN4 828 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CCDC157Q569K6 752 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 DHRS13Q6UX07 377 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 OTOAQ7RTW8 1153 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 RAB44Q7Z6P3 723 aaPredicted RBP18.31■□□□□ 0.52
SSU72-203ENST00000378725 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 VRK3Q8IV63 474 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 SLC22A15Q8IZD6 547 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 WDR48Q8TAF3 677 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 FBF1Q8TES7 1133 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CDKL2Q92772 493 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CXorf40BQ96DE9 158 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 C12orf66Q96MD2 445 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 FUT8Q9BYC5 575 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 LRRN3Q9H3W5 708 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 CORO1CQ9ULV4 474 aaPredicted RBP18.31■□□□□ 0.52
SSU72-203ENST00000378725 HEBP2Q9Y5Z4 205 aa18.31■□□□□ 0.52
SSU72-203ENST00000378725 IFRD1O00458 451 aaPredicted RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 ZW10O43264 779 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 OR1D5P58170 312 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 CCL7P80098 99 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 TIAL1Q01085 375 aaKnown RBP eCLIP18.3■□□□□ 0.52
SSU72-203ENST00000378725 ILF2Q12905 390 aaKnown RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 TMED2Q15363 201 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 SYTL3Q4VX76 610 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 CDCP2Q5VXM1 449 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 TMEM26Q6ZUK4 368 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 STRA8Q7Z7C7 330 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 TRIM48Q8IWZ4 208 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 CACTIN-AS1Q8N1I8 211 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 Q8N9G6 341 aaPredicted RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 TFGQ92734 400 aaPredicted RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 ABCG4Q9H172 646 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 CDC42EP4Q9H3Q1 356 aaKnown RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 IMP3Q9NV31 184 aaKnown RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 DHRS7Q9Y394 339 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 CFAP20Q9Y6A4 193 aaKnown RBP18.3■□□□□ 0.52
SSU72-203ENST00000378725 COLEC10Q9Y6Z7 277 aa18.3■□□□□ 0.52
SSU72-203ENST00000378725 ARHGEF17Q96PE2 2063 aaPredicted RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 IGHV1OR21-1A0A087WYE8 117 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 A0A1W2PQM1 296 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 LILRA5A6NI73 299 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 E5RI56 91 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 CASC3O15234 703 aaKnown RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 PIAS1O75925 651 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 FAM153BP0C7A2 387 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 NDUFS1P28331 727 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 CD1CP29017 333 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 ALDH4A1P30038 563 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 ATP5DP30049 168 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 EPHA4P54764 986 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 CSE1LP55060 971 aaKnown RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 KBTBD12Q3ZCT8 623 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 FAM153CQ494X1 144 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 ERMP1Q7Z2K6 904 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 ZC3HC1Q86WB0 502 aaKnown RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 ZBTB2Q8N680 514 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSU72-203ENST00000378725 SLC30A3Q99726 388 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 TXLNGYQ9BZA5 131 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 MVB12BQ9H7P6 319 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 KCNK4Q9NYG8 393 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 WASF3Q9UPY6 502 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 VWA7Q9Y334 891 aa18.29■□□□□ 0.52
SSU72-203ENST00000378725 ZFC3H1O60293 1989 aaKnown RBP18.29■□□□□ 0.52
SSU72-203ENST00000378725 VPS26AO75436 327 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 TCEA3O75764 348 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 RPLP0P05388 317 aaKnown RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 PHBP35232 272 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 SKIV2L2P42285 1042 aaKnown RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 ABCG1P45844 678 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 GPLD1P80108 840 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 NAB1Q13506 487 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 GPR18Q14330 331 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 CLPPQ16740 277 aaPredicted RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 RBM20Q5T481 1227 aaKnown RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 UBAP2Q5T6F2 1119 aaKnown RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 UGT3A1Q6NUS8 523 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 TMPRSS7Q7RTY8 843 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 TMPRSS12Q86WS5 348 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 ZNF761Q86XN6 746 aaPredicted RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 CHCHD4Q8N4Q1 142 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 SIDT2Q8NBJ9 832 aaKnown RBP18.28■□□□□ 0.52
SSU72-203ENST00000378725 PHC3Q8NDX5 983 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 GIMAP7Q8NHV1 300 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 INPP5DQ92835 1189 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 FAM136AQ96C01 138 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 FERD3LQ96RJ6 166 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 NDNQ99608 321 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 GPR21Q99679 349 aa18.28■□□□□ 0.52
SSU72-203ENST00000378725 CPNE1Q99829 537 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms