RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CHID1Q9BWS9 393 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 RAD21L1Q9H4I0 556 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 EQTNQ9NQ60 294 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 IKZF3Q9UKT9 509 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 MAP4K5Q9Y4K4 846 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TLL2Q9Y6L7 1015 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 A0A0G2JN53 185 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 DYTNA2CJ06 578 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 LCHNA4D1U4 455 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 HAS3O00219 553 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 OR10H3O60404 316 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GNRH1P01148 92 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 PRSS56P0CW18 603 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GNAZP19086 355 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 DIO3P55073 304 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SEC13P55735 322 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GSCP56915 257 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 XIAPP98170 497 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TGFBIQ15582 683 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 CST9Q5W186 159 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 R3HCC1LQ7Z5L2 792 aaKnown RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 PARGQ86W56 976 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 MMAAQ8IVH4 418 aaKnown RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SCAMP4Q969E2 229 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ROPN1LQ96C74 230 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TRIM8Q9BZR9 551 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ZCWPW2A0A1B0GU75 182 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 PDLIM1O00151 329 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 STC2O76061 302 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 TYRP14679 529 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 BUD31P41223 144 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 TEAD2Q15562 447 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 PLEKHG6Q3KR16 790 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 KCTD21Q4G0X4 260 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 DEF8Q6ZN54 512 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CHSY3Q70JA7 882 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ZNF438Q7Z4V0 828 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CCDC103Q8IW40 242 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 OR4F6Q8NGB9 312 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 SLC7A6OSQ96CW6 309 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 RPS6KB2Q9UBS0 482 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ANGPT4Q9Y264 503 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 LYVE1Q9Y5Y7 322 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 FGF19O95750 216 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 APODP05090 189 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 RING1Q06587 406 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ZNF789Q5FWF6 425 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 COLGALT2Q8IYK4 626 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 KIAA2013Q8IYS2 634 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 KIAA1191Q96A73 305 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 PHF21AQ96BD5 680 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ZIC5Q96T25 663 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 OLFM1Q99784 485 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ZBTB26Q9HCK0 441 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 OSER1Q9NX31 292 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 ZDHHC3Q9NYG2 299 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 KRT75O95678 551 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 UFM1P61960 85 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 NFKB2Q00653 900 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 RABL3Q5HYI8 236 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 EIF3MQ7L2H7 374 aaKnown RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CDK20Q8IZL9 346 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 TMEM74Q96NL1 305 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 AIF1LQ9BQI0 150 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 TDRD1Q9BXT4 1180 aaKnown RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 MAPRE3Q9UPY8 281 aa12.98□□□□□ -0.33
NPHP4-203ENST00000378169 CFAP20Q9Y6A4 193 aaKnown RBP12.98□□□□□ -0.33
NPHP4-203ENST00000378169 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 NR4A1P22736 598 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SOX6P35712 828 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 CCNFP41002 786 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 RPS9P46781 194 aaKnown RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 MYLK3Q32MK0 819 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 LIN52Q52LA3 116 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 ANXA8L1Q5VT79 327 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PM20D1Q6GTS8 502 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 MED27Q6P2C8 311 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 C16orf62Q7Z3J2 963 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 VANGL1Q8TAA9 524 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 CENPNQ96H22 339 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 B4GALT6Q9UBX8 382 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PTGDR2Q9Y5Y4 395 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 DDX60LQ5H9U9 1706 aaKnown RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 LOC730098B7Z3J9 87 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 hCG_2039718K7EN88 272 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 MYCLP1P12525 358 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 RPL3P39023 403 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms