RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 C9P02748 559 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 SNRPB2P08579 225 aaKnown RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ATXN1LP0C7T5 689 aaKnown RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 CTSCP53634 463 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 IRX1P78414 480 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 MED21Q13503 144 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 UBXN2BQ14CS0 331 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 TAF1AQ15573 450 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 GTDC1Q4AE62 458 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 TANGO2Q6ICL3 276 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 TRAF7Q6Q0C0 670 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ZBTB49Q6ZSB9 765 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 GALNT5Q7Z7M9 940 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 SLC22A9Q8IVM8 553 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ANKLE1Q8NAG6 615 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 C2CD4AQ8NCU7 369 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 OR10A6Q8NH74 314 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 BPIFB1Q8TDL5 484 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ACMSDQ8TDX5 336 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 CCDC138Q96M89 665 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 C7orf26Q96N11 449 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 SORT1Q99523 831 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 TUBB6Q9BUF5 446 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 RBCK1Q9BYM8 510 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 EIF2B3Q9NR50 452 aaKnown RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 RIC8BQ9NVN3 520 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 FBXL21Q9UKT6 434 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 PADI4Q9UM07 663 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 POMPQ9Y244 141 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ZNF860A6NHJ4 632 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 G6PDP11413 515 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 COX7A2P14406 83 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 POU2F1P14859 743 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 HOXC13P31276 330 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 CLCNKAP51800 687 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 YBX1P67809 324 aaKnown RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 GTF2H2Q13888 395 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 SPIDRQ14159 915 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 CCSMST1Q4G0I0 132 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ADNP2Q6IQ32 1131 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 GTF2H2CQ6P1K8 395 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 CRTC1Q6UUV9 634 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 C16orf89Q6UX73 402 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 MAVSQ7Z434 540 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 HID1Q8IV36 788 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 OR4K1Q8NGD4 311 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ZCCHC10Q8TBK6 192 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 NXPE3Q969Y0 559 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 EGLN2Q96KS0 407 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 NSMCE3Q96MG7 304 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 PANX3Q96QZ0 392 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 DPEP2Q9H4A9 486 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 THG1LQ9NWX6 298 aaKnown RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 MBD1Q9UIS9 605 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-203ENST00000378037 IKZF3Q9UKT9 509 aa7.97□□□□□ -1.13
CKAP2-203ENST00000378037 IGLON5A6NGN9 336 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 C16orf96A6NNT2 1141 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 PGLSO95336 258 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 ADH1CP00326 375 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 CHRM5P08912 532 aaPredicted RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 ANPEPP15144 967 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 VARSP26640 1264 aaKnown RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 VHLP40337 213 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 CRATP43155 626 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 GJA8P48165 433 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 NFE2L1Q14494 772 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 MAPKAPK3Q16644 382 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 ASTLQ6HA08 431 aaPredicted RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 HSD11B1LQ7Z5J1 315 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 C12orf40Q86WS4 652 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 NKAPQ8N5F7 415 aaKnown RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 MZB1Q8WU39 189 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 LRTOMTQ8WZ04 291 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 RTP4Q96DX8 246 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 TSGA13Q96PP4 275 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 OR52E6Q96RD3 313 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 FERD3LQ96RJ6 166 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 TMEM175Q9BSA9 504 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 DCUN1D5Q9BTE7 237 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 EFHD1Q9BUP0 239 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 KLF16Q9BXK1 252 aaPredicted RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 MFSD1Q9H3U5 465 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 AMBNQ9NP70 447 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 MIEF1Q9NQG6 463 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 PAK6Q9NQU5 681 aaPredicted RBP7.96□□□□□ -1.13
CKAP2-203ENST00000378037 FBXL12Q9NXK8 326 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 C15orf41Q9Y2V0 281 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 DNAJC15Q9Y5T4 150 aa7.96□□□□□ -1.13
CKAP2-203ENST00000378037 ICE1Q9Y2F5 2266 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 MID1O15344 667 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 MMP2P08253 660 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 COL6A1P12109 1028 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 TYRP1P17643 537 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 ITGAXP20702 1163 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 CA5AP35218 305 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 IST1P53990 364 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms