RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SCML2Q9UQR0 700 aa13.43□□□□□ -0.26
GPC6-201ENST00000377047 PCDHGA11Q9Y5H2 935 aa13.43□□□□□ -0.26
GPC6-201ENST00000377047 NR2F6P10588 404 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 NRLP54845 237 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 POU5F1Q01860 360 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 OR52J3Q8NH60 311 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 EBF3Q9H4W6 596 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 EIF2B3Q9NR50 452 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 ZNF180Q9UJW8 692 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 UNGP13051 313 aaPredicted RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 TYRP14679 529 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 AGXTP21549 392 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 SLC30A6Q6NXT4 461 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 TBC1D21Q8IYX1 336 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ZNF599Q96NL3 588 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 NOL6Q9H6R4 1146 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 TMEM138Q9NPI0 162 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ARL8BQ9NVJ2 186 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 A8MUA0 341 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 PDPK1O15530 556 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 PIGRP01833 764 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 VIPR1P32241 457 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ACVRL1P37023 503 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 CCR8P51685 355 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 RANBP3LQ86VV4 465 aaPredicted RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 SLC35G5Q96KT7 338 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 HMG20AQ9NP66 347 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 FOXO6A8MYZ6 492 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 METTL18O95568 372 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 ABHD13Q7L211 337 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 KAT2AQ92830 837 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ZDHHC3Q9NYG2 299 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 CDH7Q9ULB5 785 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 NID2Q14112 1375 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 C9J4A7 227 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 TNFRSF11BO00300 401 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 TMCC2O75069 709 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 IFNW1P05000 195 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 ARFIP1P53367 373 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
GPC6-201ENST00000377047 FUKQ8N0W3 1084 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 SUN3Q8TAQ9 357 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 LMX1AQ8TE12 382 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 SLC22A18Q96BI1 424 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 MTERF1Q99551 399 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 DIABLOQ9NR28 239 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 HS3ST4Q9Y661 456 aa13.42□□□□□ -0.26
GPC6-201ENST00000377047 CFAP20Q9Y6A4 193 aaKnown RBP13.42□□□□□ -0.26
GPC6-201ENST00000377047 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 GABRDO14764 452 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 MMP20O60882 483 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 COL6A1P12109 1028 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PTDSS1P48651 473 aaKnown RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 DCST1Q5T197 706 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 KBTBD2Q8IY47 623 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 SFRP1Q8N474 314 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 TSEN15Q8WW01 171 aaKnown RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 TP53INP1Q96A56 240 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 FCRL5Q96RD9 977 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PDCD10Q9BUL8 212 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 CALML5Q9NZT1 146 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 LMO7Q8WWI1 1683 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 IRS2Q9Y4H2 1338 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PEAK1Q9H792 1746 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 TPST2O60704 377 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 F2P00734 622 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 CCR10P46092 362 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 OC90Q02509 493 aaPredicted RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 LYSMD3Q7Z3D4 306 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 HPS6Q86YV9 775 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 AMER2Q8N7J2 671 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 C11orf65Q8NCR3 313 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 KBTBD8Q8NFY9 601 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 HCAR2Q8TDS4 363 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 GPR151Q8TDV0 419 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 ZNF483Q8TF39 744 aaPredicted RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 CKLFQ9UBR5 152 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 SATB2Q9UPW6 733 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 RIIAD1A6NNX1 92 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 DCLK1O15075 740 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 HCRTO43612 131 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 JAG1P78504 1218 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PUS10Q3MIT2 529 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms