RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 GPS2Q13227 327 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 RPS6KA1Q15418 735 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 GPR19Q15760 415 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
CLCN6-205ENST00000376492 PRAMEF17Q5VTA0 474 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 AGAP9Q5VTM2 703 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 SLC6A19Q695T7 634 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 CYB5D1Q6P9G0 228 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 DARS2Q6PI48 645 aaKnown RBP12.82□□□□□ -0.36
CLCN6-205ENST00000376492 KDELC1Q6UW63 502 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 C11orf96Q7Z7L8 435 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 TRAM1L1Q8N609 369 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 RBMXL3Q8N7X1 1067 aaKnown RBP12.82□□□□□ -0.36
CLCN6-205ENST00000376492 SLC38A9Q8NBW4 561 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 ADAMTS17Q8TE56 1095 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 UBXN4Q92575 508 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 MR1Q95460 341 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
CLCN6-205ENST00000376492 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 L2HGDHQ9H9P8 463 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 MAGEE1Q9HCI5 957 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 SLAMF7Q9NQ25 335 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF711Q9Y462 761 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 CRYBG3Q68DQ2 2970 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
CLCN6-205ENST00000376492 A6NL46 340 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 CPNE3O75131 537 aaKnown RBP12.81□□□□□ -0.36
CLCN6-205ENST00000376492 PMPCBO75439 489 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 SCRG1O75711 98 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 CDK14O94921 469 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 NDST3O95803 873 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 LDLRP01130 860 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 BPIP17213 487 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 IDSP22304 550 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 ITGA1P56199 1179 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 WNT3AP56704 352 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 ACY1Q03154 408 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 MPP3Q13368 585 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 RAPSNQ13702 412 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 NR6A1Q15406 480 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 PCSK7Q16549 785 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 WASH2PQ6VEQ5 465 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 TRAPPC5Q8IUR0 188 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 TMEM126BQ8IUX1 230 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 RBM12BQ8IXT5 1001 aaKnown RBP12.81□□□□□ -0.36
CLCN6-205ENST00000376492 SLC35B2Q8TB61 432 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
CLCN6-205ENST00000376492 MRGPRX2Q96LB1 330 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 FCRL4Q96PJ5 515 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
CLCN6-205ENST00000376492 FAM118BQ9BPY3 351 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 CHST8Q9H2A9 424 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 UBP1Q9NZI7 540 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
CLCN6-205ENST00000376492 ANKRD17O75179 2603 aaKnown RBP12.81□□□□□ -0.36
CLCN6-205ENST00000376492 TCRBV7S2A1N4TA0A589 114 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 C5orf60A6NFR6 353 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 WIPF3A6NGB9 483 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 AURKAO14965 403 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF185O15231 689 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 KCNN4O15554 427 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 VEGFDO43915 354 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 DPM1O60762 260 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 STK10O94804 968 aaKnown RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 TMEM63AO94886 807 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 LPOP22079 712 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ARL4DP49703 201 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 PDE1BQ01064 536 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ANKRD20A2Q5SQ80 823 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ANKRD20A1Q5TYW2 823 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ANKRD20A3Q5VUR7 823 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 PDPK2PQ6A1A2 396 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ITPRIPL1Q6GPH6 555 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 FBXO38Q6PIJ6 1188 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 FAM83HQ6ZRV2 1179 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 SLC13A5Q86YT5 568 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 PBKQ96KB5 322 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 PPM1MQ96MI6 270 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 SPATA13Q96N96 652 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 TLR10Q9BXR5 811 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 FRMD8P1Q9BZ68 369 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 SLC29A3Q9BZD2 475 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 GBA3Q9H227 469 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 BPIFA1Q9NP55 256 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 NFKBIL1Q9UBC1 381 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 TTC7AQ9ULT0 858 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 SNX12Q9UMY4 172 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms