RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 NTRK1P04629 796 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 CSRP3P50461 194 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 GDF10P55107 478 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 POU6F1Q14863 301 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 GPR33Q49SQ1 333 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 ARMC6Q6NXE6 501 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 SERPINA9Q86WD7 417 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 D2HGDHQ8N465 521 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 HM13Q8TCT9 377 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 CDKN2AIPNLQ96HQ2 116 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 FCRL4Q96PJ5 515 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 LHX9Q9NQ69 397 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 ZNF71Q9NQZ8 489 aaPredicted RBP13.87□□□□□ -0.19
NELFE-201ENST00000375425 FGF21Q9NSA1 209 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 NLE1Q9NVX2 485 aaPredicted RBP13.87□□□□□ -0.19
NELFE-201ENST00000375425 PIH1D1Q9NWS0 290 aaKnown RBP13.87□□□□□ -0.19
NELFE-201ENST00000375425 ZDHHC3Q9NYG2 299 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 KCND3Q9UK17 655 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 IGLV3-16A0A075B6K0 115 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 H7C0S8 307 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 FURINP09958 794 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 PRSS56P0CW18 603 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 POLR2CP19387 275 aaPredicted RBP13.86□□□□□ -0.19
NELFE-201ENST00000375425 ACRV1P26436 265 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 NDUFS1P28331 727 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 ARCN1P48444 511 aaKnown RBP13.86□□□□□ -0.19
NELFE-201ENST00000375425 KPNA2P52292 529 aaKnown RBP13.86□□□□□ -0.19
NELFE-201ENST00000375425 TAS2R42Q7RTR8 314 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 TAB3Q8N5C8 712 aaPredicted RBP13.86□□□□□ -0.19
NELFE-201ENST00000375425 SLC35B2Q8TB61 432 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 STYXQ8WUJ0 223 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 ABHD17AQ96GS6 310 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 PPM1MQ96MI6 270 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 FERD3LQ96RJ6 166 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 AKIRIN1Q9H9L7 192 aaPredicted RBP13.86□□□□□ -0.19
NELFE-201ENST00000375425 HEBP2Q9Y5Z4 205 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 KCNMB2Q9Y691 235 aa13.86□□□□□ -0.19
NELFE-201ENST00000375425 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PIPSLA2A3N6 862 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PSMD3O43242 534 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 CREG1O75629 220 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 ZBTB11O95625 1053 aaPredicted RBP13.85□□□□□ -0.19
NELFE-201ENST00000375425 AP2A1O95782 977 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PDHA2P29803 388 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 TUBB4BP68371 445 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 DNASE1L3Q13609 305 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 SEPT6Q14141 434 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 P3H1Q32P28 736 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 ZNF658BQ4V348 819 aaPredicted RBP13.85□□□□□ -0.19
NELFE-201ENST00000375425 FBXO38Q6PIJ6 1188 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PIANPQ8IYJ0 282 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 CLDN19Q8N6F1 224 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PHC3Q8NDX5 983 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 ACVR1CQ8NER5 493 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 C9orf43Q8TAL5 461 aaPredicted RBP13.85□□□□□ -0.19
NELFE-201ENST00000375425 CT55Q8WUE5 264 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 LCN9Q8WX39 176 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 OR52A5Q9H2C5 316 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 COG4Q9H9E3 785 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 PCDHGA6Q9Y5G7 932 aa13.85□□□□□ -0.19
NELFE-201ENST00000375425 MROH6A6NGR9 719 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 SLC9B1P1A6NJY1 282 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 IFRD1O00458 451 aaPredicted RBP13.84□□□□□ -0.19
NELFE-201ENST00000375425 TLE1Q04724 770 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 CACNG1Q06432 222 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 PRKAA1Q13131 559 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 GPR19Q15760 415 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 SKIDA1Q1XH10 827 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 FAM199XQ6PEV8 388 aaPredicted RBP13.84□□□□□ -0.19
NELFE-201ENST00000375425 TMEM135Q86UB9 458 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 CARFQ8N187 725 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 ZNF501Q96CX3 271 aaPredicted RBP13.84□□□□□ -0.19
NELFE-201ENST00000375425 NRTNQ99748 197 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 TWSG1Q9GZX9 223 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 SRMSQ9H3Y6 488 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 VPS37BQ9H9H4 285 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 POLHQ9Y253 713 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 CAPN6Q9Y6Q1 641 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 MYO18BQ8IUG5 2567 aa13.84□□□□□ -0.19
NELFE-201ENST00000375425 CCDC78A2IDD5 438 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 GSAPA4D1B5 854 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 C21orf140B9A014 251 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 RECKO95980 971 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 CDH3P22223 829 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 PRDX3P30048 256 aaKnown RBP13.83□□□□□ -0.2
NELFE-201ENST00000375425 STIP1P31948 543 aaKnown RBP13.83□□□□□ -0.2
NELFE-201ENST00000375425 PREPP48147 710 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 CD151P48509 253 aa13.83□□□□□ -0.2
NELFE-201ENST00000375425 PRKG2Q13237 762 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms