RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 STARD8Q92502 1023 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 FCRL4Q96PJ5 515 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MAT2BQ9NZL9 334 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ANKRD12Q6UB98 2062 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 A8MV72 311 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RASAL1O95294 804 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DHRS4L1P0CG22 281 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SPAM1P38567 509 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TRIM32Q13049 653 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RAPSNQ13702 412 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ZFP28Q8NHY6 868 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RNFT2Q96EX2 444 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 HAPLN3Q96S86 360 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 WRAP53Q9BUR4 548 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 NLNQ9BYT8 704 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MAGEE1Q9HCI5 957 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 EQTNQ9NQ60 294 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 IRAK2O43187 625 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 GJB3O75712 270 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CSKP41240 450 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 IL10RBQ08334 325 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 IKBKEQ14164 716 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 NTAN1Q96AB6 310 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MTERF1Q99551 399 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PDLIM7Q9NR12 457 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ERGIC3Q9Y282 383 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RNF11Q9Y3C5 154 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 A0A0D9SEW6 157 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TMCC2O75069 709 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 GPR32O75388 356 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TNFRSF21O75509 655 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CCNKO75909 580 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PGLSO95336 258 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 OR1D2P34982 312 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ERVK-8P63133 956 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 IL18Q14116 193 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DAG1Q14118 895 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 R3HCC1LQ7Z5L2 792 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DEPDC4Q8N2C3 294 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CENPSQ8N2Z9 138 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 AMER2Q8N7J2 671 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RPL10LQ96L21 214 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MTRRQ9UBK8 725 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 LOC100130705A0A1B0GUX0 176 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 A0A1W2PPW3 197 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 AURKAO14965 403 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 STATHP02808 62 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PRKAR2AP13861 404 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CD68P34810 354 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ETV4P43268 484 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TAS2R41P59536 307 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 USP39Q53GS9 565 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RBM48Q5RL73 367 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 GDF6Q6KF10 455 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ARRDC4Q8NCT1 418 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 OR5AK3PQ8NH89 298 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RAB2BQ8WUD1 216 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TP53INP1Q96A56 240 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 C12orf42Q96LP6 360 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MIR1-1HGQ9H1L0 117 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 C8orf4Q9NR00 106 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ITM2BQ9Y287 266 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 NTSP30990 170 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MTA1Q13330 715 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 NPTX1Q15818 432 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 VARS2Q5ST30 1063 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MARVELD2Q8N4S9 558 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 ZFAND2BQ8WV99 257 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 STON2Q8WXE9 905 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TEPSINQ96N21 525 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SEMA3GQ9NS98 782 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 AHSPQ9NZD4 102 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 COL2A1P02458 1487 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 AXIN1O15169 862 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SLC7A4O43246 635 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 GMFGO60234 142 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RSL1D1O76021 490 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TUFMP49411 452 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DIO3P55073 304 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CDH4P55283 916 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 TPTEP56180 551 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 PMS2P3Q13401 168 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 CMPK2Q5EBM0 449 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MS4A13Q5J8X5 152 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SYNDIG1Q9H7V2 258 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 MRM3Q9HC36 420 aaKnown RBP6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DNAJC11Q9NVH1 559 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 DNAJB9Q9UBS3 223 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 RAB23Q9ULC3 237 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 SHROOM3Q8TF72 1996 aa6.44□□□□□ -1.38
SMC1A-202ENST00000375340 H3BNH8 94 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TBX1O43435 398 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 DENRO43583 198 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SCELO95171 688 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms