RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ARHGAP36Q6ZRI8 547 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 GET4Q7L5D6 327 aaPredicted RBP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 FAM72BQ86X60 149 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 RAB43Q86YS6 212 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 C7orf31Q8N865 590 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 CYP2S1Q96SQ9 504 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 ERVK-6Q9BXR3 956 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 ROGDIQ9GZN7 287 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SMPD4Q9NXE4 827 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SHOXO15266 292 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SLC22A3O75751 556 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 TARDBPQ13148 414 aaKnown RBP eCLIP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 GALNT3Q14435 633 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 KANK2Q63ZY3 851 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 TMEM207Q6UWW9 146 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 NECAB2Q7Z6G3 386 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SPATA22Q8NHS9 363 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 COPS5Q92905 334 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 PDLIM5Q96HC4 596 aaKnown RBP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 PPP1R16BQ96T49 567 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 LIMD1Q9UGP4 676 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 MKLN1Q9UL63 735 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 A3GALT2U3KPV4 340 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 MEIOCA2RUB1 952 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 TSPAN9O75954 239 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 JCHAINP01591 159 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 IL7P13232 177 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 NAGAP17050 411 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 CTRB1P17538 263 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 MVKQ03426 396 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 GPR158Q5T848 1215 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 CTRB2Q6GPI1 263 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 DENND5AQ6IQ26 1287 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 SDE2Q6IQ49 451 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 ISCA2Q86U28 154 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 DEFB106AQ8N104 65 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 TCAIMQ8N3R3 496 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 NPWQ8N729 165 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC47A1Q96FL8 570 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 ITPAQ9BY32 194 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 SOCS7O14512 581 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 FAM20BO75063 409 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 IFI30P13284 250 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 IL1RL1Q01638 556 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 EID3Q8N140 333 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 OR5K1Q8NHB7 308 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 OR2A14Q96R47 310 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 MRPL45Q9BRJ2 306 aaKnown RBP20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 GON7Q9BXV9 100 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 ACTR8Q9H981 624 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 NUFIP1Q9UHK0 495 aaKnown RBP20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 NME7Q9Y5B8 376 aa20.26■□□□□ 0.83
TMEFF1-201ENST00000374879 ZNF780AO75290 641 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 ETV3P41162 512 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 PLIN5Q00G26 463 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 IRF3Q14653 427 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 SUZ12Q15022 739 aaKnown RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 SPANXN2Q5MJ10 180 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 FBXO16Q8IX29 292 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 OR8H2Q8N162 312 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 SH3RF2Q8TEC5 729 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 PRRG3Q9BZD7 231 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 RIBC2Q9H4K1 309 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 RNF6Q9Y252 685 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 ORC6Q9Y5N6 252 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 SNTNA6NMZ2 147 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 TFECO14948 347 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 GRK5P34947 590 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 RFX2P48378 723 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 PTGR2Q8N8N7 351 aaPredicted RBP20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 DTX3Q8N9I9 347 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 TNKS2Q9H2K2 1166 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 AIG1Q9NVV5 245 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 EVPLQ92817 2033 aa20.25■□□□□ 0.83
TMEFF1-201ENST00000374879 LOC100506127A0A0U1RQW1 187 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SCO1O75880 301 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 MT-CYBP00156 380 aaPredicted RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 ENPP1P22413 925 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SERPINH1P50454 418 aaKnown RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 AP2S1P53680 142 aaPredicted RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 POU6F2P78424 691 aaPredicted RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 HABP4Q5JVS0 413 aaKnown RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 DLEU7Q6UYE1 221 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 GLB1L3Q8NCI6 653 aaPredicted RBP20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SETD9Q8NE22 299 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 PTERQ96BW5 349 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 ACOX2Q99424 681 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 RAPGEFL1Q9UHV5 662 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 ADGRE2Q9UHX3 823 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 TRHDEQ9UKU6 1024 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 PPP2R3BQ9Y5P8 575 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 PEX16Q9Y5Y5 336 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 LOC110117498-PIK3R3F6TDL0 507 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 M0R082 166 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 UQCRC1P31930 480 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms