RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ANGPTL3Q9Y5C1 460 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 K7EPI3 171 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 TRIM38O00635 465 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 SPINT1O43278 529 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 PRNPP04156 253 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 ELFN1P0C7U0 828 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 MSH3P20585 1137 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 RPIAP49247 311 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 ERVK-8P63133 956 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 FLOT2Q14254 428 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 MUM1Q2TAK8 710 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 ZNF284Q2VY69 593 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 HNRNPA1L2Q32P51 320 aaKnown RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 PLEKHS1Q5SXH7 462 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 C9orf64Q5T6V5 341 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 NAIF1Q69YI7 327 aaPredicted RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 METTL2BQ6P1Q9 378 aaKnown RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 IL27RAQ6UWB1 636 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 UBE2R2Q712K3 238 aaPredicted RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 DNAJC9Q8WXX5 260 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 LMAN2LQ9H0V9 348 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 SLC52A3Q9NQ40 469 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 GDE1Q9NZC3 331 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 CROTQ9UKG9 612 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 EPOPA6NHQ4 379 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 H3BNX3 289 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 AP2A2O94973 939 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 ANXA5P08758 320 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 MPC1LP0DKB6 136 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 ATXN8OSP0DMR3 200 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 ACOX1Q15067 660 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 VPS26BQ4G0F5 336 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 CDKL4Q5MAI5 379 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 SFRP1Q8N474 314 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 BEND7Q8N7W2 519 aaPredicted RBP19.2■□□□□ 0.66
HDAC1-201ENST00000373548 FAM156AQ8NDB6 213 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 BTN2A2Q8WVV5 523 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 ASB11Q8WXH4 323 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 TIFAQ96CG3 184 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 HBEGFQ99075 208 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 C1orf50Q9BV19 199 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 SLC12A9Q9BXP2 914 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 BRINP2Q9C0B6 783 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 NKX2-4Q9H2Z4 354 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 TRPV4Q9HBA0 871 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 ARL15Q9NXU5 204 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 OBP2AQ9NY56 170 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 MAP10Q9P2G4 905 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 DOCK8Q8NF50 2099 aa19.2■□□□□ 0.66
HDAC1-201ENST00000373548 EDDM13A0A1B0GTR0 161 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 C8GP07360 202 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 MAGEA10P43363 369 aaPredicted RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 GRIK2Q13002 908 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 EIF4HQ15056 248 aaKnown RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ATP6AP1LQ52LC2 224 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 TANGO2Q6ICL3 276 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 BLOC1S3Q6QNY0 202 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 GPR149Q86SP6 731 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 DHDDSQ86SQ9 333 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 PCYOX1LQ8NBM8 494 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 SKA2Q8WVK7 121 aaPredicted RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ARRDC3Q96B67 414 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ROPN1LQ96C74 230 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 NAF1Q96HR8 494 aaKnown RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 TEX37Q96LM6 180 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 WRAP53Q9BUR4 548 aaKnown RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 PBX4Q9BYU1 374 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 IGFLR1Q9H665 355 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 PARVBQ9HBI1 364 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 SPAG4Q9NPE6 437 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 DZANK1Q9NVP4 752 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 NDUFAF1Q9Y375 327 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 OR2AG2A6NM03 316 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ACOT8O14734 319 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 KPNA5O15131 536 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 STK16O75716 305 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 BCAS2O75934 225 aaPredicted RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ENO2P09104 434 aaPredicted RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 TCN1P20061 433 aaPredicted RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 HMOX2P30519 316 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ZFP36L2P47974 494 aaKnown RBP19.19■□□□□ 0.66
HDAC1-201ENST00000373548 CDKL1Q00532 357 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ZNF234Q14588 700 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ABRAXAS2Q15018 415 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 PDGFRLQ15198 375 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 KBTBD2Q8IY47 623 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 CHCHD4Q8N4Q1 142 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 PPFIBP2Q8ND30 876 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 OR8D1Q8WZ84 308 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 ELMO1Q92556 727 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 GLYATL1Q969I3 302 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 AP2M1Q96CW1 435 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 VPS35Q96QK1 796 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 SLC39A3Q9BRY0 314 aa19.19■□□□□ 0.66
HDAC1-201ENST00000373548 SYNCRIPO60506 623 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 ITGB7P26010 798 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 GTF2A1P52655 376 aaPredicted RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 ZXDCQ2QGD7 858 aaPredicted RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 CMPK2Q5EBM0 449 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 VITQ6UXI7 678 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms