RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 OGDHQ02218 1023 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 CEP78Q5JTW2 689 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DEFB119Q8N690 84 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 FAM98AQ8NCA5 519 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 TTLQ8NG68 377 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 SLC47A1Q96FL8 570 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DGCR6LQ9BY27 220 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 C6orf62Q9GZU0 229 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 CENPXA8MT69 81 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 C9J4A7 227 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 TIMP1P01033 207 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 ATP1B2P14415 290 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 PCSK2P16519 638 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 CCR8P51685 355 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 GALNT2Q10471 571 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 SUZ12Q15022 739 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 PAFAH1B3Q15102 231 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 PHF19Q5T6S3 580 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 METTL21CQ5VZV1 264 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 CYP2U1Q7Z449 544 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 JSRP1Q96MG2 331 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 ANKRD27Q96NW4 1050 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 TDRD1Q9BXT4 1180 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 VRTNQ9H8Y1 702 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 PRAMEF11O60813 436 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 ADH1BP00325 375 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 SAGP10523 405 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 PGDP52209 483 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 RALGPS2Q86X27 583 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 LIX1Q8N485 282 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 NMD3Q96D46 503 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 XYLT2Q9H1B5 865 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 A0A1B0GW55 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 KLF8O95600 359 aaPredicted RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L2P0CJ85 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L3P0CJ86 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L4P0CJ87 422 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L5P0CJ88 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L6P0CJ89 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4L7P0CJ90 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 RPL10P27635 214 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 C11orf65Q8NCR3 313 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 KLHDC7BQ96G42 594 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 EFCAB11Q9BUY7 163 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 LRMDAQ9H2I8 198 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 DUX4Q9UBX2 424 aa14.5□□□□□ -0.09
NDC1-201ENST00000371429 CFAP20Q9Y6A4 193 aaKnown RBP14.5□□□□□ -0.09
NDC1-201ENST00000371429 GJA5P36382 358 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 PSMD4P55036 377 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 RTP2Q5QGT7 225 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 FAM180AQ6UWF9 173 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.49□□□□□ -0.091e-8■■■■■ 73.6
NDC1-201ENST00000371429 TFGQ92734 400 aaPredicted RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 PAAF1Q9BRP4 392 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 NMUR2Q9GZQ4 415 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 NECTIN3Q9NQS3 549 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 KCNK6Q9Y257 313 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 BACE2Q9Y5Z0 518 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 MFN2O95140 757 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 HOXB6P17509 224 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 SLC25A11Q02978 314 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 CYP4F3Q08477 520 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 NFATC2Q13469 925 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 TOP3AQ13472 1001 aaPredicted RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 GLYATQ6IB77 296 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 CLVS1Q8IUQ0 354 aaPredicted RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 LMX1AQ8TE12 382 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 SMARCD2Q92925 531 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 NECTIN4Q96NY8 510 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 RNPEPL1Q9HAU8 725 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 ERGIC3Q9Y282 383 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 A0A0G2JN53 185 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 PIP5K1BO14986 540 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 IL12BP29460 328 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 PRAMEF14Q5SWL7 426 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 VWA5B1Q5TIE3 1220 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 PRAMEF13Q5VWM6 474 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 TRIQKQ629K1 86 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 ZNF730Q6ZMV8 503 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 TDRPQ86YL5 185 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 OR10T2Q8NGX3 314 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 NUSAP1Q9BXS6 441 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 ELL3Q9HB65 397 aaPredicted RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 B4GALT6Q9UBX8 382 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 HEPACAM2A8MVW5 462 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 FOXO6A8MYZ6 492 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 HAS3O00219 553 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 RFPL2O75678 378 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 CNMDO75829 334 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 ZNF37AP17032 561 aaPredicted RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 AGXTP21549 392 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 AP1S2P56377 157 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 RPL26P61254 145 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 RFX4Q33E94 735 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 PDZK1Q5T2W1 519 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 ANKRD46Q86W74 232 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 SHISA4Q96DD7 197 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 GRHL1Q9NZI5 618 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms