RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SARS2Q9NP81 518 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 FETUBQ9UGM5 382 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 TRMT6Q9UJA5 497 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 PSMD13Q9UNM6 376 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 CDYLQ9Y232 598 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 DHRS7Q9Y394 339 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 HEBP2Q9Y5Z4 205 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 IKBKGQ9Y6K9 419 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 ZNF292O60281 2723 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 LY6G6EA0A0G2JKS1 128 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 FAM95CA0A1B0GW59 222 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ZW10O43264 779 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 GP1BAP07359 652 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CBSLP0DN79 551 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 NDUFS1P28331 727 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 PDHA2P29803 388 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CBSP35520 551 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 POU4F1Q01851 419 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ILKQ13418 452 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 GBX1Q14549 363 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CLCA4Q14CN2 919 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.022e-11■■■■□ 20.4
PRPF38B-202ENST00000370022 BRD3Q15059 726 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 RPE65Q16518 533 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 RBM20Q5T481 1227 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 LRRC8EQ6NSJ5 796 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 TRIM48Q8IWZ4 208 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 DEFB124Q8NES8 71 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 UBLCP1Q8WVY7 318 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ZFPM2Q8WW38 1151 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 PATE1Q8WXA2 126 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CXorf40BQ96DE9 158 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ATXN7L3BQ96GX2 97 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 GPR21Q99679 349 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 GPR22Q99680 433 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CCDC77Q9BR77 488 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 POPDC3Q9HBV1 291 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 SCHIP1Q9P0W5 487 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CPNE7Q9UBL6 633 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 COLEC10Q9Y6Z7 277 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 U3KQA8 63 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 EXOC1LA0A1B0GW35 172 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 VIPP01282 170 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 INHBAP08476 426 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 MTHFD1P11586 935 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CDK4P11802 303 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ENO3P13929 434 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 FDXRP22570 491 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ABCG1P45844 678 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 MAPK9P45984 424 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC12A2P55011 1212 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 UBE2IP63279 158 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 HHEXQ03014 270 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 NAA30Q147X3 362 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 NAPRTQ6XQN6 538 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 NEK10Q6ZWH5 1172 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 TAOK1Q7L7X3 1001 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 SIDT2Q8NBJ9 832 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 CD200R1Q8TD46 325 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 TSPAN17Q96FV3 270 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ELMO2Q96JJ3 720 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 RMDN2Q96LZ7 410 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 C12orf66Q96MD2 445 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 EPB41L4BQ9H329 900 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 UCK1Q9HA47 277 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 IMP3Q9NV31 184 aaKnown RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 DLL3Q9NYJ7 618 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ZNF624Q9P2J8 865 aaPredicted RBP15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 LRIT1Q9P2V4 623 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ZNF180Q9UJW8 692 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
PRPF38B-202ENST00000370022 ASCC3Q8N3C0 2202 aaKnown RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 PTPRZ1P23471 2315 aaPredicted RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 ZFC3H1O60293 1989 aaKnown RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 OR52A4PA6NMU1 304 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 RHPN2P1A8MT19 583 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 ITGA2BP08514 1039 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 CNTFP26441 200 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 ACADLP28330 430 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC19A1P41440 591 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 MSH2P43246 934 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 GPR3P46089 330 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 RGS4P49798 205 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 SERPINB9P50453 376 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 CDKN2DP55273 166 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 MAZP56270 477 aaKnown RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 NR1D2Q14995 579 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 SFTPA2Q8IWL1 248 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 TFGQ92734 400 aaPredicted RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 FAM136AQ96C01 138 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 INSM2Q96T92 566 aaPredicted RBP15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 PAFAH2Q99487 392 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 PPCSQ9HAB8 311 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms