RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.31
UBE3D-203ENST00000369747 SLC30A1Q9Y6M5 507 aa17.02■□□□□ 0.31
UBE3D-203ENST00000369747 GLYATL1P3A0A0U1RQE8 302 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 NPEPPSL1A6NEC2 478 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 IGLON5A6NGN9 336 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 SUPT3HB4E1H0 165 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 PPP6CO00743 305 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 TSPAN6O43657 245 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 SUPT3HO75486 399 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 RECQL5O94762 991 aaPredicted RBP17.01■□□□□ 0.31
UBE3D-203ENST00000369747 CDK14O94921 469 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 ESR1P03372 595 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 GFAPP14136 432 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 SPAM1P38567 509 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 SH3BP2P78314 561 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 HERC3Q15034 1050 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 CHRNA6Q15825 494 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 UGT3A2Q3SY77 523 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 C6orf163Q5TEZ5 329 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 C1orf146Q5VVC0 180 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 KIRREL3Q8IZU9 778 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 FRMD1Q8N878 549 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 STMN2Q93045 179 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 CCDC97Q96F63 343 aaPredicted RBP17.01■□□□□ 0.31
UBE3D-203ENST00000369747 NSUN5Q96P11 429 aaKnown RBP17.01■□□□□ 0.31
UBE3D-203ENST00000369747 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
UBE3D-203ENST00000369747 ZFR2Q9UPR6 939 aaKnown RBP17.01■□□□□ 0.31
UBE3D-203ENST00000369747 NCKAP1Q9Y2A7 1128 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 PLXNB3Q9ULL4 1909 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
UBE3D-203ENST00000369747 PSMD11O00231 422 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 WNT9AO14904 365 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 SORBS2O94875 1100 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 UGT1A6P19224 532 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 UGT1A1P22309 533 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 UGT1A4P22310 534 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 UGT1A3P35503 534 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 UGT1A5P35504 534 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 PTDSS1P48651 473 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 CYLC2Q14093 348 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 FBXO39Q8N4B4 442 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 EEF1AKMT1Q8WVE0 214 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 PLEKHG4BQ96PX9 1271 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 C19orf43Q9BQ61 176 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 RIOK2Q9BVS4 552 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 FAM83DQ9H4H8 585 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 APPL1Q9UKG1 709 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 CYP8B1Q9UNU6 501 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3DA0A087WVF3 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3IA0A087WXS9 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3EA0A087X179 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3KA0A087X1G2 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3FA6NER0 549 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 IQCF5A8MTL0 148 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3LB9A6J9 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 BTN3A1O00481 513 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 AIM2O14862 343 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 KLK8O60259 260 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 LZTS3O60299 673 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 FGF4P08620 206 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3HP0C7X1 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 CHRM3P20309 590 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 EEF1DP29692 281 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 CLCN7P51798 805 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBL3Q12788 808 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 NFATC2Q13469 925 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 PPP1R3AQ16821 1122 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 ATP13A5Q4VNC0 1218 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3GQ6DHY5 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3CQ6IPX1 549 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 SERPINA9Q86WD7 417 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 MYLK4Q86YV6 388 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17■□□□□ 0.31
UBE3D-203ENST00000369747 CPNE9Q8IYJ1 553 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 TBC1D3Q8IZP1 549 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 FAM160A2Q8N612 972 aaPredicted RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 RLN3Q8WXF3 142 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 KLK6Q92876 244 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 LINGO1Q96FE5 620 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 DTD2Q96FN9 168 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 ABCG8Q9H221 673 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 ASB8Q9H765 288 aa17■□□□□ 0.31
UBE3D-203ENST00000369747 STX18Q9P2W9 335 aaKnown RBP17■□□□□ 0.31
UBE3D-203ENST00000369747 LAMA1P25391 3075 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 SYCE1LA8MT33 242 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 E5RI56 91 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 K7ESM1 405 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 PRMT5O14744 637 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-203ENST00000369747 PDE5AO76074 875 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 CXCL12P48061 93 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 NUDT2P50583 147 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 IL2P60568 153 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 PPP2CBP62714 309 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 PPP2CAP67775 309 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 CREB5Q02930 508 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 HENMT1Q5T8I9 393 aaKnown RBP16.99■□□□□ 0.31
UBE3D-203ENST00000369747 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 CLYBLQ8N0X4 340 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 HMGCLL1Q8TB92 370 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 DTX3LQ8TDB6 740 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms