RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 VPS37BQ9H9H4 285 aa20.03■□□□□ 0.8
SMNDC1-201ENST00000369592 MARCH4Q9P2E8 410 aaPredicted RBP20.03■□□□□ 0.8
SMNDC1-201ENST00000369592 KLHL3Q9UH77 587 aa20.03■□□□□ 0.8
SMNDC1-201ENST00000369592 SLC5A10A0PJK1 596 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 OR5K3A6NET4 321 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 QSOX1O00391 747 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 KIF5CO60282 957 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 KRT14P02533 472 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 ACADLP28330 430 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 NMBRP28336 390 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 CXADRP78310 365 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 VAC14Q08AM6 782 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 SRSF6Q13247 344 aaKnown RBP20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 TRIP13Q15645 432 aaPredicted RBP20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 ANKRD22Q5VYY1 191 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 CAND1Q86VP6 1230 aaKnown RBP20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 SLC39A7Q92504 469 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 CPT1BQ92523 772 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 ZDHHC12Q96GR4 267 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 SLC41A2Q96JW4 573 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 TEFMQ96QE5 360 aaKnown RBP20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 TWSG1Q9GZX9 223 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 APMAPQ9HDC9 416 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 BFARQ9NZS9 450 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 FAM8A1Q9UBU6 413 aa20.02■□□□□ 0.8
SMNDC1-201ENST00000369592 TEX51A0A1B0GUA7 166 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 CYSRT1A8MQ03 144 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 LIN7AO14910 233 aaPredicted RBP20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 ZNF185O15231 689 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 TMEM63AO94886 807 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 MGAT1P26572 445 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 NDUFS1P28331 727 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 GPS1Q13098 491 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 BOP1Q14137 746 aaKnown RBP20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 DCAF12Q5T6F0 453 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 CCDC137Q6PK04 289 aaKnown RBP20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 PCSK4Q6UW60 755 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 FAM129CQ86XR2 697 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 MCUQ8NE86 351 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 OR6P1Q8NGX9 317 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 NKD1Q969G9 470 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 ZPBPQ9BS86 351 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 ZMYND15Q9H091 742 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 SYBUQ9NX95 663 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 PILRAQ9UKJ1 303 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 SOX13Q9UN79 622 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 HEBP2Q9Y5Z4 205 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 COLEC10Q9Y6Z7 277 aa20.01■□□□□ 0.79
SMNDC1-201ENST00000369592 IGHV5-51A0A0C4DH38 117 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 BHMG1C9JSJ3 638 aaPredicted RBP20■□□□□ 0.79
SMNDC1-201ENST00000369592 STMND1H3BQB6 276 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 PHF2O75151 1096 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 PLA2G2AP14555 144 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 NELFEP18615 380 aaKnown RBP20■□□□□ 0.79
SMNDC1-201ENST00000369592 PREPP48147 710 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 FNTAP49354 379 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 PRAMEP78395 509 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 KLHL35Q6PF15 583 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 MFSD3Q96ES6 412 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 CD180Q99467 661 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 EIF2AK3Q9NZJ5 1116 aaKnown RBP20■□□□□ 0.79
SMNDC1-201ENST00000369592 PYCARDQ9ULZ3 195 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 CDYLQ9Y232 598 aa20■□□□□ 0.79
SMNDC1-201ENST00000369592 TMEM184BQ9Y519 407 aaPredicted RBP20■□□□□ 0.79
SMNDC1-201ENST00000369592 AVILO75366 819 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 DLGAP3O95886 979 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 FTH1P02794 183 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 MLNP12872 115 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 WT1P19544 449 aaPredicted RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 MAGEA3P43357 314 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 ARCN1P48444 511 aaKnown RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 PPM1FP49593 454 aaPredicted RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 VPS41P49754 854 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 FASTKD1Q53R41 847 aaKnown RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 ARHGAP40Q5TG30 622 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 CACHD1Q5VU97 1274 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 PAPD7Q5XG87 772 aaKnown RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 CEACAM20Q6UY09 585 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 FAM92BQ6ZTR7 304 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 MPP5Q8N3R9 675 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 ACVR1CQ8NER5 493 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 UBXN4Q92575 508 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 CTRCQ99895 268 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 CARD6Q9BX69 1037 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 P2RY12Q9H244 342 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 TFB2MQ9H5Q4 396 aaKnown RBP19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 MVB12BQ9H7P6 319 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 CATSPERZQ9NTU4 200 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 SPTBP11277 2137 aa19.99■□□□□ 0.79
SMNDC1-201ENST00000369592 FANCGO15287 622 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 CD3EAPO15446 510 aaKnown RBP19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 GPC4O75487 556 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 OR56A5P0C7T3 313 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 SH3BP2P78314 561 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 IRGCQ6NXR0 463 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 CCDC81Q6ZN84 652 aa19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 TIPARPQ7Z3E1 657 aaKnown RBP19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 LDB1Q86U70 411 aaPredicted RBP19.98■□□□□ 0.79
SMNDC1-201ENST00000369592 CARFQ8N187 725 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms