RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CST11Q9H112 138 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 FKBP7Q9Y680 259 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 FADS2P1A8MWK0 482 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 CLDN4O14493 209 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 FAUP35544 74 aaKnown RBP17.92■□□□□ 0.46
SNX27-202ENST00000368841 PUS10Q3MIT2 529 aaKnown RBP17.92■□□□□ 0.46
SNX27-202ENST00000368841 FOXRED2Q8IWF2 684 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 BRSK1Q8TDC3 778 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 TTTY10Q9BZA0 68 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 A0A1W2PRU2 124 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 SLC6A9P48067 706 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ATAT1Q5SQI0 421 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ABHD15Q6UXT9 468 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 STYXQ8WUJ0 223 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ZNF224Q9NZL3 707 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 DIP2CQ9Y2E4 1556 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 MID1O15344 667 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 CYP3A5P20815 502 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 KCNJ5P48544 419 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 METTL27Q8N6F8 245 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 ACMSDQ8TDX5 336 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 KCNC2Q96PR1 638 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 IL12RB2Q99665 862 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 GPN1Q9HCN4 374 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PCDHGB3Q9Y5G1 929 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PDPK1O15530 556 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PCDHGA12O60330 932 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 STK16O75716 305 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 C4BPAP04003 597 aaKnown RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 ZNF806P0C7X5 589 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 SMPD1P17405 629 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 TNFRSF8P28908 595 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 TSPAN5P62079 268 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 ILF2Q12905 390 aaKnown RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 MKL1Q969V6 931 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 DPYSL5Q9BPU6 564 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 B3GALT2O43825 422 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 SLC35G6P0C7Q6 338 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 SDC2P34741 201 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 ADRA1BP35368 520 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 MLLT3P42568 568 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 CLCN7P51798 805 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 ACTR3P61158 418 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 POTEHQ6S545 545 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 TRABD2AQ86V40 505 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PIGXQ8TBF5 258 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PYCR2Q96C36 320 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 FAM240BA0A1B0GVZ2 78 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 DHPSP49366 369 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 DQX1Q8TE96 717 aaKnown RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 FAM83DQ9H4H8 585 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 INTS10Q9NVR2 710 aaKnown RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 PRAMEF33A0A0G2JMD5 474 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PRAMEF10O60809 474 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 MMP14P50281 582 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 OC90Q02509 493 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 RBM15BQ8NDT2 890 aaKnown RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 VWDEQ8N2E2 1590 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 PRH1P02810 166 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 CCNOP22674 350 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 CDKN1CP49918 316 aaPredicted RBP17.91■□□□□ 0.46
SNX27-202ENST00000368841 GNA12Q03113 381 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 TMC8Q8IU68 726 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 CCDC120Q96HB5 630 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
SNX27-202ENST00000368841 CLUHO75153 1309 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 GPR25O00155 361 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ACVR2AP27037 513 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 UAP1L1Q3KQV9 507 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 KIAA1161Q6NSJ0 714 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 PRDM16Q9HAZ2 1276 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 MIOSQ9NXC5 875 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 TCAF1Q9Y4C2 921 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 PCDHB1Q9Y5F3 818 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ANXA2P2A6NMY6 339 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 CILPO75339 1184 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 CCNB2O95067 398 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 TGFB1P01137 390 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ANXA2P07355 339 aaKnown RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 IL7RP16871 459 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 CPN2P22792 545 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 EIF2S3P41091 472 aaKnown RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 LRP8Q14114 963 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ARL13AQ5H913 290 aaPredicted RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 PLD5Q8N7P1 536 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 TNFAIP8L1Q8WVP5 186 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 DNAAF2Q9NVR5 837 aaKnown RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 PAPSS2O95340 614 aaPredicted RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 DGKGP49619 791 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 INHBEP58166 350 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ARSJQ5FYB0 599 aaPredicted RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 VARS2Q5ST30 1063 aaKnown RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ZBTB8BQ8NAP8 495 aaPredicted RBP17.9■□□□□ 0.46
SNX27-202ENST00000368841 HEXDCQ8WVB3 486 aa17.9■□□□□ 0.46
SNX27-202ENST00000368841 ZFP3Q96NJ6 502 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms