RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 MFAP3LO75121 409 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 ZBTB11O95625 1053 aaPredicted RBP10.08□□□□□ -0.8
CLRN3-201ENST00000368671 AGTP01019 485 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 POLBP06746 335 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 POLR2CP19387 275 aaPredicted RBP10.08□□□□□ -0.8
CLRN3-201ENST00000368671 CDH3P22223 829 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 GNLYP22749 145 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 CCL11P51671 97 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 KPNA2P52292 529 aaKnown RBP10.08□□□□□ -0.8
CLRN3-201ENST00000368671 GEMP55040 296 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 TUBB4BP68371 445 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 GPS2Q13227 327 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 IL10RAQ13651 578 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 TUBB2AQ13885 445 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 TAZQ16635 292 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 NADK2Q4G0N4 442 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 PRAMEF17Q5VTA0 474 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 VSTM4Q8IW00 320 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 OR4K2Q8NGD2 314 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 OR2L2Q8NH16 312 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 THAP4Q8WY91 577 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF501Q96CX3 271 aaPredicted RBP10.08□□□□□ -0.8
CLRN3-201ENST00000368671 RMDN2Q96LZ7 410 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 PPM1MQ96MI6 270 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 QKIQ96PU8 341 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLRN3-201ENST00000368671 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 SLC25A23Q9BV35 468 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 TUBB2BQ9BVA1 445 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 TLR10Q9BXR5 811 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 GPR87Q9BY21 358 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 ASB8Q9H765 288 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 C10orf88Q9H8K7 445 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 LRRC4CQ9HCJ2 640 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 KCND1Q9NSA2 647 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 SLC24A2Q9UI40 661 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 ALG6Q9Y672 507 aa10.08□□□□□ -0.8
CLRN3-201ENST00000368671 C2orf81A6NN90 581 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 HACD1B0YJ81 288 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 H7C0C1 242 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 KLK3P07288 261 aaPredicted RBP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 RBL1P28749 1068 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 PTGIRP43119 386 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 ATP5OP48047 213 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 MARCKSL1P49006 195 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 PGDP52209 483 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 TMPRSS15P98073 1019 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 PRKAA1Q13131 559 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 OLIG2Q13516 323 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 TAF1AQ15573 450 aaPredicted RBP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CCDC181Q5TID7 509 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 DAAM2Q86T65 1068 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CFAP206Q8IYR0 622 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 LILRA3Q8N6C8 439 aaPredicted RBP10.07□□□□□ -0.8
CLRN3-201ENST00000368671 OR4E2Q8NGC2 313 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CPT1CQ8TCG5 803 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 DCUN1D1Q96GG9 259 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 FERD3LQ96RJ6 166 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 GORASP1Q9BQQ3 440 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 HEMGNQ9BXL5 484 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 ING2Q9H160 280 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 GBA3Q9H227 469 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CHST8Q9H2A9 424 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 FAM96AQ9H5X1 160 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 KIR3DX1Q9H7L2 352 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 FANCEQ9HB96 536 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 CRLS1Q9UJA2 301 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 TRHDEQ9UKU6 1024 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 ACSL5Q9ULC5 683 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 INTUQ9ULD6 942 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 SNX7Q9UNH6 387 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 COLEC10Q9Y6Z7 277 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
CLRN3-201ENST00000368671 MACROD2A1Z1Q3 448 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 GSAPA4D1B5 854 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 SLC9B1P1A6NJY1 282 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 SGTAO43765 313 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 ANXA9O76027 345 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 AGFG2O95081 481 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LCA5LO95447 670 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 NDUFS1P28331 727 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 MAGEA1P43355 309 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 ABRQ12979 859 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LAMB3Q13751 1172 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 TCEAL1Q15170 157 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 BCL7AQ4VC05 210 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 FHL5Q5TD97 284 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 FAM69BQ5VUD6 431 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 IZUMO3Q5VZ72 239 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 ITPRIPL1Q6GPH6 555 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 LCN10Q6JVE6 187 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 KATNAL2Q8IYT4 538 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 RCOR2Q8IZ40 523 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 DSELQ8IZU8 1212 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 ENDOVQ8N8Q3 282 aaKnown RBP10.06□□□□□ -0.8
CLRN3-201ENST00000368671 SLC38A9Q8NBW4 561 aa10.06□□□□□ -0.8
CLRN3-201ENST00000368671 OR13C4Q8NGS5 318 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms