RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PTERQ96BW5 349 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 BTBD9Q96Q07 612 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 Q9H521 79 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 ZBTB26Q9HCK0 441 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CACNA2D2Q9NY47 1150 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 IL17CQ9P0M4 197 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 B4GALT6Q9UBX8 382 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 MBD1Q9UIS9 605 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 CROTQ9UKG9 612 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 SARDHQ9UL12 918 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 GPC6Q9Y625 555 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 PRSS21Q9Y6M0 314 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 A0A087X1B8 175 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 E5RI56 91 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PPP6CO00743 305 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 DENRO43583 198 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 PAPSS2O95340 614 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 DDX6P26196 483 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPM3-212ENST00000368533 TIAL1Q01085 375 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPM3-212ENST00000368533 RALGDSQ12967 914 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 APOFQ13790 326 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 FASTKQ14296 549 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 CCDC85BQ15834 202 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 EGFLAMQ63HQ2 1017 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CRTC1Q6UUV9 634 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 VITQ6UXI7 678 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PGAM4Q8N0Y7 254 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PBXIP1Q96AQ6 731 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 VOPP1Q96AW1 172 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PPWD1Q96BP3 646 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 PCDHAC1Q9H158 963 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 BRD9Q9H8M2 597 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 EML4Q9HC35 981 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 IL26Q9NPH9 171 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 TBC1D23Q9NUY8 699 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 TCF20Q9UGU0 1960 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 PRR23AA6NEV1 266 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 UBXN8O00124 270 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 LTA4HP09960 611 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 CDH3P22223 829 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 TCEA1P23193 301 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 GDI1P31150 447 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PSME3P61289 254 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CREB5Q02930 508 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 KIF19Q2TAC6 998 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 AFTPHQ6ULP2 937 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CUZD1Q86UP6 607 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 SERPINA9Q86WD7 417 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 STK40Q8N2I9 435 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 LKAAEAR1Q8TD35 194 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 GPR78Q96P69 363 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 GDF15Q99988 308 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CRLS1Q9UJA2 301 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 HS3ST2Q9Y278 367 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 DOCK9Q9BZ29 2069 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 MYO10Q9HD67 2058 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 A8MT66 165 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CDC7O00311 574 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 SDHDO14521 159 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 IPO13O94829 963 aaKnown RBP10.48□□□□□ -0.73
TPM3-212ENST00000368533 FGF19O95750 216 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 NNMTP40261 264 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 DPP6P42658 865 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CLCN5P51795 746 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 BNIP3Q12983 259 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 ZNF423Q2M1K9 1284 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 Q8N9G6 341 aaPredicted RBP10.48□□□□□ -0.73
TPM3-212ENST00000368533 EME1Q96AY2 570 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 THAP11Q96EK4 314 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 PLEKHA8Q96JA3 519 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 VPS50Q96JG6 964 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CNDP1Q96KN2 507 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 ZFP14Q9HCL3 533 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 HPS4Q9NQG7 708 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 C6orf203Q9P0P8 240 aaPredicted RBP10.48□□□□□ -0.73
TPM3-212ENST00000368533 DEC1Q9P2X7 70 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 COMMD10Q9Y6G5 202 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 WDFY4Q6ZS81 3184 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 A0A1W2PPW3 197 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 NPEPPSL1A6NEC2 478 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 PSMD12O00232 456 aaPredicted RBP10.48□□□□□ -0.73
TPM3-212ENST00000368533 SOX11P35716 441 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 ETV3P41162 512 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CDK9P50750 372 aaKnown RBP10.48□□□□□ -0.73
TPM3-212ENST00000368533 C21orf59P57076 290 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 OR4D1Q15615 310 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 PIGGQ5H8A4 983 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 CTSL3PQ5NE16 218 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 Q6ZVL8 140 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 AHI1Q8N157 1196 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 OR9I1Q8NGQ6 314 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 LPGAT1Q92604 370 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 TSPAN17Q96FV3 270 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 MRGPRX3Q96LB0 322 aa10.48□□□□□ -0.73
TPM3-212ENST00000368533 PKP2Q99959 881 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms