RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FAM92BQ6ZTR7 304 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 OR6P1Q8NGX9 317 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 NKD1Q969G9 470 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 TEFMQ96QE5 360 aaKnown RBP18.47■□□□□ 0.55
CKS1B-203ENST00000368439 UBL7Q96S82 380 aaPredicted RBP18.47■□□□□ 0.55
CKS1B-203ENST00000368439 KIFC1Q9BW19 673 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 SYBUQ9NX95 663 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 MARCH4Q9P2E8 410 aaPredicted RBP18.47■□□□□ 0.55
CKS1B-203ENST00000368439 SNX12Q9UMY4 172 aa18.47■□□□□ 0.55
CKS1B-203ENST00000368439 AP3B1O00203 1094 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 QSOX1O00391 747 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 CES2O00748 559 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 ZNF185O15231 689 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 WT1P19544 449 aaPredicted RBP18.46■□□□□ 0.55
CKS1B-203ENST00000368439 MGAT1P26572 445 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 NMBRP28336 390 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 VPS41P49754 854 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 SEPHS1P49903 392 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 SH3BP2P78314 561 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 PRAMEP78395 509 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 GPS1Q13098 491 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 GSE1Q14687 1217 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 CACHD1Q5VU97 1274 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 CCDC137Q6PK04 289 aaKnown RBP18.46■□□□□ 0.55
CKS1B-203ENST00000368439 CEACAM20Q6UY09 585 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 VASH2Q86V25 355 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 CPT1BQ92523 772 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.46■□□□□ 0.55
CKS1B-203ENST00000368439 NAP1L3Q99457 506 aaPredicted RBP18.46■□□□□ 0.55
CKS1B-203ENST00000368439 ZPBPQ9BS86 351 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 MRM3Q9HC36 420 aaKnown RBP18.46■□□□□ 0.55
CKS1B-203ENST00000368439 BFARQ9NZS9 450 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 PILRAQ9UKJ1 303 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 HEBP2Q9Y5Z4 205 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 COLEC10Q9Y6Z7 277 aa18.46■□□□□ 0.55
CKS1B-203ENST00000368439 IGHV5-51A0A0C4DH38 117 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 SLC5A10A0PJK1 596 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 LIN7AO14910 233 aaPredicted RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 KIF5CO60282 957 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 TMEM63AO94886 807 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 FTH1P02794 183 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 ARNTP27540 789 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 ACADLP28330 430 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 NDUFS1P28331 727 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 BOP1Q14137 746 aaKnown RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 FASTKD1Q53R41 847 aaKnown RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 KLHL35Q6PF15 583 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 NAPRTQ6XQN6 538 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 LDB1Q86U70 411 aaPredicted RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 CAND1Q86VP6 1230 aaKnown RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 PHC3Q8NDX5 983 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 ACVR1CQ8NER5 493 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 ELMO1Q92556 727 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 SLC41A2Q96JW4 573 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 FERD3LQ96RJ6 166 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 NRTNQ99748 197 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 HRASLS2Q9NWW9 162 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 TMEM184BQ9Y519 407 aaPredicted RBP18.45■□□□□ 0.54
CKS1B-203ENST00000368439 PCDHB11Q9Y5F2 797 aa18.45■□□□□ 0.54
CKS1B-203ENST00000368439 BHMG1C9JSJ3 638 aaPredicted RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 POLR1CO15160 346 aaPredicted RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 CD3EAPO15446 510 aaKnown RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 PHF2O75151 1096 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 AVILO75366 819 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 RASSF9O75901 435 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 OR56A5P0C7T3 313 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 NELFEP18615 380 aaKnown RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 TERF1P54274 439 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 MANEAQ5SRI9 462 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 TIPARPQ7Z3E1 657 aaKnown RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 OOSP2Q86WS3 158 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 LKAAEAR1Q8TD35 194 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 UBXN4Q92575 508 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 TTC9Q92623 222 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 TFGQ92734 400 aaPredicted RBP18.44■□□□□ 0.54
CKS1B-203ENST00000368439 MFSD3Q96ES6 412 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 MAP3K3Q99759 626 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 CATSPERZQ9NTU4 200 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 SOX13Q9UN79 622 aa18.44■□□□□ 0.54
CKS1B-203ENST00000368439 OR6C74A6NCV1 312 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 IFRD1O00458 451 aaPredicted RBP18.43■□□□□ 0.54
CKS1B-203ENST00000368439 ATXN7O15265 892 aaPredicted RBP18.43■□□□□ 0.54
CKS1B-203ENST00000368439 RAD1O60671 282 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 DLGAP3O95886 979 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 CCR7P32248 378 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 FNTAP49354 379 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 KPNA2P52292 529 aaKnown RBP18.43■□□□□ 0.54
CKS1B-203ENST00000368439 CES3Q6UWW8 571 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 MPP5Q8N3R9 675 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 OR4E2Q8NGC2 313 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 OR52E1Q8NGJ3 308 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 OR6C1Q96RD1 312 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 CD180Q99467 661 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 TTC1Q99614 292 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 P2RY12Q9H244 342 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 TFB2MQ9H5Q4 396 aaKnown RBP18.43■□□□□ 0.54
CKS1B-203ENST00000368439 MVB12BQ9H7P6 319 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 PYCARDQ9ULZ3 195 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 CDYLQ9Y232 598 aa18.43■□□□□ 0.54
CKS1B-203ENST00000368439 TLCD2A6NGC4 264 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms