RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CDYLQ9Y232 598 aa21.89■■□□□ 1.1
ECHDC1-203ENST00000368291 SNX24Q9Y343 169 aa21.89■■□□□ 1.1
ECHDC1-203ENST00000368291 LOXL2Q9Y4K0 774 aa21.89■■□□□ 1.1
ECHDC1-203ENST00000368291 FAM187AA6NFU0 413 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 SMAPO00193 183 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 C9P02748 559 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 F7P08709 466 aaPredicted RBP21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 PGAM1P18669 254 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 ACADLP28330 430 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 GFERP55789 205 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 TRA2AQ13595 282 aaKnown RBP eCLIP21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 BOP1Q14137 746 aaKnown RBP21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 TBC1D25Q3MII6 688 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 ZNF789Q5FWF6 425 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 FOXR1Q6PIV2 292 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 ARHGAP22Q7Z5H3 698 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 SDCCAG8Q86SQ7 713 aaPredicted RBP21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 PDZD3Q86UT5 571 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 UNC5BQ8IZJ1 945 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 KIR3DX1Q9H7L2 352 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 SLC24A2Q9UI40 661 aa21.88■■□□□ 1.09
ECHDC1-203ENST00000368291 UBA6A0AVT1 1052 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 CDRT15L2A8MXV6 281 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 HGSO14964 777 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 GPC4O75487 556 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 S1PR4O95977 384 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 AMD1P17707 334 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ITIH1P19827 911 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ETV5P41161 510 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 PPM1FP49593 454 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 CRYMQ14894 314 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 LONRF1Q17RB8 773 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 BBS9Q3SYG4 887 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 DNAJC21Q5F1R6 531 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 MAATS1Q7Z4T9 603 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 LRRC6Q86X45 466 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 VRK3Q8IV63 474 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 DENND6AQ8IWF6 608 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 LSMEM2Q8N112 164 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 PHC3Q8NDX5 983 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ZFPM2Q8WW38 1151 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 TMEM159Q96B96 161 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 CMKLR1Q99788 373 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ERP44Q9BS26 406 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 GNPTGQ9UJJ9 305 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 RAXQ9Y2V3 346 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 HEBP2Q9Y5Z4 205 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 EPG5Q9HCE0 2579 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 SRRM3A6NNA2 597 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 F8W8V4 182 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 URI1O94763 535 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 TNFSF15O95150 251 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 AOAHP28039 575 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 CAPZBP47756 277 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ADARP55265 1226 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 EIF3BP55884 814 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 SNAP47Q5SQN1 464 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 RNF187Q5TA31 235 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 DUPD1Q68J44 220 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ZNF470Q6ECI4 717 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 PTRHD1Q6GMV3 140 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 PLXDC1Q8IUK5 500 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 PDIK1LQ8N165 341 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 TFGQ92734 400 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ZNF578Q96N58 590 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 FERD3LQ96RJ6 166 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 NRTNQ99748 197 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 RAB33BQ9H082 229 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 ZMYND15Q9H091 742 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 C20orf96Q9NUD7 363 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 CRYL1Q9Y2S2 319 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 TEX264Q9Y6I9 313 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 COLEC10Q9Y6Z7 277 aa21.87■■□□□ 1.09
ECHDC1-203ENST00000368291 A8MU76 341 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 IFRD1O00458 451 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 ITGA2BP08514 1039 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 CCL4P13236 92 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 FMO4P31512 558 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 ELK3P41970 407 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 LEPRP48357 1165 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 CSE1LP55060 971 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 ERVPABLB-1P60509 514 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 PPP1CAP62136 330 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 CTBP1Q13363 440 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 HIF1AQ16665 826 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 HP1BP3Q5SSJ5 553 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 ZNF449Q6P9G9 518 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 CLEC14AQ86T13 490 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 SNIP1Q8TAD8 396 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 FGF11Q92914 225 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 TRIM44Q96DX7 344 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 DPH5Q9H2P9 285 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 INTS10Q9NVR2 710 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 GRHL1Q9NZI5 618 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 EPHA6Q9UF33 1036 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 PISDQ9UG56 409 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 KLHL3Q9UH77 587 aa21.86■■□□□ 1.09
ECHDC1-203ENST00000368291 SNRNP200O75643 2136 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 CAPN5O15484 640 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms