RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TEFMQ96QE5 360 aaKnown RBP12.71□□□□□ -0.37
PTPRK-207ENST00000368226 GPER1Q99527 375 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 TRMOQ9BU70 441 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 SUV39H2Q9H5I1 410 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 ZNF222Q9UK12 451 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 TMCC2O75069 709 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 IFNGP01579 166 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 FUT4P22083 530 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 NSG1P42857 185 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 CDH12P55289 794 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 LGALS3BPQ08380 585 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 LRRC32Q14392 662 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 TMLHEQ9NVH6 421 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 SLIT2O94813 1529 aa12.71□□□□□ -0.37
PTPRK-207ENST00000368226 A0A075B6Q4 140 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CAPN8A6NHC0 703 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 SSNA1O43805 119 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CLDN7O95471 211 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CHRM5P08912 532 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 IGFBP5P24593 272 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 POU5F1Q01860 360 aaKnown RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 UAP1L1Q3KQV9 507 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 RALGPS1Q5JS13 557 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 PEG10Q86TG7 708 aaKnown RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 LNX2Q8N448 690 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 GAL3ST1Q99999 423 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 WNT9AO14904 365 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CCR10P46092 362 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 XKR4Q5GH76 650 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 LDLRAP1Q5SW96 308 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CXXC5Q7LFL8 322 aaKnown RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 CLNKQ7Z7G1 428 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 HOPXQ9BPY8 73 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-207ENST00000368226 KXD1Q9BQD3 176 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.38
PTPRK-207ENST00000368226 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 LDB2O43679 373 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PLOD3O60568 738 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 FGF18O76093 207 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PTGER3P43115 390 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 IDH3AP50213 366 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 STXBP1P61764 594 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 OR5AK3PQ8NH89 298 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TSEN15Q8WW01 171 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 DPYSL5Q9BPU6 564 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TLR9Q9NR96 1032 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PCDHGB3Q9Y5G1 929 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 OAS3Q9Y6K5 1087 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 B3GALT2O43825 422 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 COL6A2P12110 1019 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 HTR7P34969 479 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 ASMTP46597 345 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 HNMTP50135 292 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 ARF5P84085 180 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 GRB14Q14449 540 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 GANABQ14697 944 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 FAM174BQ3ZCQ3 159 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PHF19Q5T6S3 580 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 APLFQ8IW19 511 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TMEM145Q8NBT3 493 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CEP295NLQ96MC4 621 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 GATA5Q9BWX5 397 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 DNAJB4Q9UDY4 337 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 GPC6Q9Y625 555 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 HCN1O60741 890 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SIX3O95343 332 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CLUP10909 449 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PAQR3Q6TCH7 311 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TMCO2Q7Z6W1 182 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CLIP4Q8N3C7 705 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CNTN3Q9P232 1028 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PPM1HQ9ULR3 514 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PRPF19Q9UMS4 504 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 DGKBQ9Y6T7 804 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CASKO14936 926 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 GSC2O15499 205 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SERPINA1P01009 418 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 C9P02748 559 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 CD247P20963 164 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 IL12RB1P42701 662 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 HTRA3P83110 453 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 MC1RQ01726 317 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms