RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 CNTRLQ7Z7A1 2325 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 UNC5CO95185 931 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 MMP2P08253 660 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 PIRTP0C851 137 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ST6GAL1P15907 406 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 POLR2CP19387 275 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ITGAXP20702 1163 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 CYP2A7P20853 494 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 IL1R2P27930 398 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 MIPP30301 263 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 GMPRP36959 345 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 NSFP46459 744 aaKnown RBP8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 HCAR3P49019 387 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 LMAN1P49257 510 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 CTSCP53634 463 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 EPHB1P54762 984 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 JAM2P57087 298 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 PRKD1Q15139 912 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 MAN2A1Q16706 1144 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 VWA3BQ502W6 1294 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 HSP90AA4PQ58FG1 418 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 RALGPS1Q5JS13 557 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF569Q5MCW4 686 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ERMARDQ5T6L9 678 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 MARC1Q5VT66 337 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ALG1LQ6GMV1 187 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 FAM180AQ6UWF9 173 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 RPTNQ6XPR3 784 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 CDHR3Q6ZTQ4 885 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF677Q86XU0 584 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 BCORP1Q8N888 145 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 OR2Y1Q8NGV0 311 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 RNF217Q8TC41 542 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 NR4A3Q92570 626 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF653Q96CK0 615 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 MTFMTQ96DP5 389 aaKnown RBP8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 IP6K3Q96PC2 410 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 TREX2Q9BQ50 279 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 NUP85Q9BW27 656 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 DLL4Q9NR61 685 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 TAS2R14Q9NYV8 317 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 PCDHGB6Q9Y5F9 930 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 SEC16AO15027 2179 aa8.22□□□□□ -1.09
HMGB1P39-201ENST00000366304 GPR89AB7ZAQ6 455 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 C9J4A7 227 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGPSO00116 658 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PEX12O00623 359 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 SOCS6O14544 535 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 GPR39O43194 453 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 WIPF1O43516 503 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 GPR89BP0CG08 455 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 MTHFD1P11586 935 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 DRD2P14416 443 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 FOLR3P41439 243 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PREPP48147 710 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 CSNK1G2P78368 415 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 ITKQ08881 620 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 AIMP2Q13155 320 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 NFE2L1Q14494 772 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 TLR1Q15399 786 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 C3AR1Q16581 482 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 ANKRD20A8PQ5CZ79 823 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PRAMEF13Q5VWM6 474 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 TXNRD3NBQ6F5E7 133 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 LINC00696Q6ZRV3 163 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 B4GALNT4Q76KP1 1039 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 TGIF2LYQ8IUE0 185 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 CEP97Q8IW35 865 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 RAVER1Q8IY67 606 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 ELOA2Q8IYF1 753 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 OR1N1Q8NGS0 311 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 SPOCK3Q9BQ16 436 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 DHRS4Q9BTZ2 278 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 SPRTNQ9H040 489 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 ENKD1Q9H0I2 346 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PCDH9Q9HC56 1237 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAM60AQ9NP50 221 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PLA2G3Q9NZ20 509 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PKD2L2Q9NZM6 624 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 DHCR7Q9UBM7 475 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 SUCOQ9UBS9 1254 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC24A2Q9UI40 661 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 TINAGQ9UJW2 476 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 POMT2Q9UKY4 750 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 RPH3AQ9Y2J0 694 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 NCOA6Q14686 2063 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 FN1P02751 2386 aaKnown RBP8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 DOCK10Q96BY6 2186 aa8.21□□□□□ -1.1
HMGB1P39-201ENST00000366304 PCM1Q15154 2024 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CCDC88CQ9P219 2028 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 RGSL1A5PLK6 1076 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 BTN3A3O00478 584 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 AURKAO14965 403 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNHIT1O43257 154 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 VEGFDO43915 354 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms