RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PEX2P28328 305 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 CD34P28906 385 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 CHRNA7P36544 502 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PNPLA4P41247 253 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 MATKP42679 507 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 STX17P56962 302 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 TBX4P57082 545 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM193AP78312 1265 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PRKCEQ02156 737 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 FOXD4Q12950 439 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PSG7Q13046 419 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 TRA2AQ13595 282 aaKnown RBP eCLIP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 BLMHQ13867 455 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 MTF1Q14872 753 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ISXQ2M1V0 245 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 KRTAP6-3Q3LI67 103 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 TRIM60Q495X7 471 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAAH2Q6GMR7 532 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 SIGIRRQ6IA17 410 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PGBD2Q6P3X8 592 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PAPD4Q6PIY7 484 aaKnown RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 CCDC149Q6ZUS6 474 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 Q75L30 129 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 RAB11FIP2Q7L804 512 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 CATSPERDQ86XM0 798 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PTOV1Q86YD1 416 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 GATAD2AQ86YP4 633 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 BEST3Q8N1M1 668 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZCCHC9Q8N567 271 aaKnown RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 CCDC33Q8N5R6 958 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZBTB2Q8N680 514 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 C4orf32Q8N8J7 132 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF491Q8N8L2 437 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 LINC01555Q8NAE3 123 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 USP38Q8NB14 1042 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 C11orf45Q8TAV5 145 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 HMGCLL1Q8TB92 370 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM71BQ8TC56 605 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF486Q96H40 463 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 GRAMD2BQ96HH9 432 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 LRGUKQ96M69 825 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 COLEC11Q9BWP8 271 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 STRA6Q9BX79 667 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 MTMR12Q9C0I1 747 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 BRD8Q9H0E9 1235 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 SHARPINQ9H0F6 387 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ING2Q9H160 280 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 SIL1Q9H173 461 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 KCNN2Q9H2S1 579 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 GORASP2Q9H8Y8 452 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 WSB2Q9NYS7 404 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR6C2Q9NZP2 312 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 NDUFAF4Q9P032 175 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 POLLQ9UGP5 575 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARMCX3Q9UH62 379 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 IP6K2Q9UHH9 426 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ABCG2Q9UNQ0 655 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 PSG11Q9UQ72 335 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 MAN2B2Q9Y2E5 1009 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 YIPF1Q9Y548 306 aa-0.1□□□□□ -2.43
RNU6-54P-201ENST00000365563 ADGRF5Q8IZF2 1346 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLIT3O75094 1523 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 MYO16Q9Y6X6 1858 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 A0A1B0GTH9 108 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 A0A1W2PPC4 97 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 A0A1W2PR80 420 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A26D6RGX4 464 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 STX16-NPEPL1H3BU86 382 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SCO2O43819 266 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 DAB1O75553 588 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 CEACAM4O75871 244 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 BAIAP3O94812 1187 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 UFL1O94874 794 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 TOXO94900 526 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 RENP00797 406 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 H1F0P07305 194 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 CHRM4P08173 479 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PCP11498 1178 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ACP5P13686 325 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 LMO2P25791 158 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 MEOX2P50222 304 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SUOXP51687 545 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 THOP1P52888 689 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 OVGP1Q12889 678 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF177Q13360 481 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 DCTN1Q14203 1278 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 VEPH1Q14D04 833 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 EFTUD2Q15029 972 aaKnown RBP eCLIP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 RPS6KA2Q15349 733 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC18A3Q16572 532 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PTPROQ16827 1216 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 BTBD16Q32M84 506 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 IQCCQ4KMZ1 466 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SGO1Q5FBB7 561 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SPECC1Q5M775 1068 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 C9orf129Q5T035 196 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ATPAF1Q5TC12 328 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 Q5W150 140 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms