RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SUFUQ9UMX1 484 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 PRKAB1Q9Y478 270 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 PCYT1BQ9Y5K3 369 aaPredicted RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 CFAP47Q6ZTR5 3102 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 LIN7AO14910 233 aaPredicted RBP20.24■□□□□ 0.83
SHISA4-201ENST00000362011 TSPAN12O95859 305 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 CHN1P15882 459 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 GLRBP48167 497 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 PPARDQ03181 441 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 HSPA14Q0VDF9 509 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 ACAP2Q15057 778 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 PYCR3Q53H96 274 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 STPG1Q5TH74 334 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 PMS2CLQ68D20 193 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 LVRNQ6Q4G3 990 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 ARMCX6Q7L4S7 300 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 IQCHQ86VS3 1027 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 AMZ2Q86W34 360 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 MGARPQ8TDB4 240 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 DENND1AQ8TEH3 1009 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 OR1E3Q8WZA6 343 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 GLMNQ92990 594 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 TMEM159Q96B96 161 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 GPR78Q96P69 363 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 TIMM29Q9BSF4 260 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 UNKQ9C0B0 810 aaKnown RBP20.24■□□□□ 0.83
SHISA4-201ENST00000362011 COG4Q9H9E3 785 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 CYP4F12Q9HCS2 524 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 TM9SF3Q9HD45 589 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 MRPL40Q9NQ50 206 aaKnown RBP20.24■□□□□ 0.83
SHISA4-201ENST00000362011 EMCNQ9ULC0 261 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 SLCO1B1Q9Y6L6 691 aa20.24■□□□□ 0.83
SHISA4-201ENST00000362011 CNOT1A5YKK6 2376 aaKnown RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 A0A1W2PR77 199 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 SLC5A10A0PJK1 596 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 POLR3GO15318 223 aaPredicted RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 ZBTB14O43829 449 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 PLIN3O60664 434 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 GPC4O75487 556 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 FUCA1P04066 466 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 PROCP04070 461 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 MPC1LP0DKB6 136 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 VCLP18206 1134 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 TFEBP19484 476 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 GNPDA1P46926 289 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 DHPSP49366 369 aaPredicted RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 OVGP1Q12889 678 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 ZNF658BQ4V348 819 aaPredicted RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 TECRLQ5HYJ1 363 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 HHATQ5VTY9 493 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 SLC22A18ASQ8N1D0 253 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 FSTL5Q8N475 847 aaPredicted RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 CCDC63Q8NA47 563 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 OR2M4Q96R27 311 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 CARS2Q9HA77 564 aaKnown RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 TSR3Q9UJK0 312 aaKnown RBP20.23■□□□□ 0.83
SHISA4-201ENST00000362011 MID2Q9UJV3 735 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 CDYLQ9Y232 598 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 GPSM3Q9Y4H4 160 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 GON4LQ3T8J9 2241 aa20.23■□□□□ 0.83
SHISA4-201ENST00000362011 ADAMTS9Q9P2N4 1935 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 ARHGEF17Q96PE2 2063 aaPredicted RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 KCNJ13O60928 360 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 SLCO2B1O94956 709 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 RBP1P09455 135 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 ETV4P43268 484 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 SRP54P61011 504 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 PLOD1Q02809 727 aaPredicted RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 CCDC6Q16204 474 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 PLK5Q496M5 336 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 LYSMD4Q5XG99 296 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 NEK10Q6ZWH5 1172 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 CHST15Q7LFX5 561 aaPredicted RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 PIWIL4Q7Z3Z4 852 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 CFAP206Q8IYR0 622 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 ARMC2Q8NEN0 867 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 TSACCQ96A04 125 aaPredicted RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 PDXPQ96GD0 296 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 MRPL57Q9BQC6 102 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 MRPL46Q9H2W6 279 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 TFB2MQ9H5Q4 396 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 INTS9Q9NV88 658 aaKnown RBP20.22■□□□□ 0.83
SHISA4-201ENST00000362011 XPR1Q9UBH6 696 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 GULP1Q9UBP9 304 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 SLC23A2Q9UGH3 650 aa20.22■□□□□ 0.83
SHISA4-201ENST00000362011 SPTY2D1-AS1A0A0U1RR47 76 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 CCDC189A1A4V9 331 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 NPEPPSL1A6NEC2 478 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 BTN3A1O00481 513 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 WNT1P04628 370 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 ACP5P13686 325 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 MPLP40238 635 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 IRX4P78413 519 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 DMPKQ09013 629 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 NFE2L1Q14494 772 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 ALG11Q2TAA5 492 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 RD3Q7Z3Z2 195 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 ISCA2Q86U28 154 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 VRK3Q8IV63 474 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms