RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 VRK3Q8IV63 474 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 OR6Y1Q8NGX8 325 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 NSRP1Q9H0G5 558 aaKnown RBP17.66■□□□□ 0.42
CCDC7-203ENST00000362006 DUSP15Q9H1R2 295 aaPredicted RBP17.66■□□□□ 0.42
CCDC7-203ENST00000362006 PARVBQ9HBI1 364 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 EML5Q05BV3 1969 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 UBXN8O00124 270 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 TDGF1P13385 188 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 GFAPP14136 432 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 IMPDH1P20839 514 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 CYP2A7P20853 494 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 CDKL1Q00532 357 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
CCDC7-203ENST00000362006 TGFBIQ15582 683 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 METRNLQ641Q3 311 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 UBE2R2Q712K3 238 aaPredicted RBP17.66■□□□□ 0.42
CCDC7-203ENST00000362006 FBXO39Q8N4B4 442 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 MFSD2AQ8NA29 543 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 MCOLN3Q8TDD5 553 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 KLHDC7BQ96G42 594 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 FGF22Q9HCT0 170 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 AASDHPPTQ9NRN7 309 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 THAP1Q9NVV9 213 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 CD274Q9NZQ7 290 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 FAM8A1Q9UBU6 413 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 KLQ9UEF7 1012 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 PRKAB1Q9Y478 270 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 CEP192Q8TEP8 1941 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 CACNA1IQ9P0X4 2223 aa17.66■□□□□ 0.42
CCDC7-203ENST00000362006 STX16-NPEPL1H3BU86 382 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 STX16O14662 325 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 RRP9O43818 475 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 FUCA1P04066 466 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 HIST1H2AGP0C0S8 130 aaPredicted RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 HIST1H2ADP20671 130 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PREPP48147 710 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 ALDH18A1P54886 795 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 RACK1P63244 317 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 BST1Q10588 318 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PPP1R3AQ16821 1122 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PLA2G4EQ3MJ16 856 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CHST15Q7LFX5 561 aaPredicted RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 BMP8AQ7Z5Y6 402 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 RASGRP3Q8IV61 690 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 OR13H1Q8NG92 308 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 EXT2Q93063 718 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 L3HYPDHQ96EM0 354 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 HIST1H2AHQ96KK5 128 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 OR2M4Q96R27 311 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 HIST1H2AJQ99878 128 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 H2AFJQ9BTM1 129 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CYP4F12Q9HCS2 524 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 GPR27Q9NS67 375 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 TSR3Q9UJK0 312 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 FBXO4Q9UKT5 387 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 GPSM3Q9Y4H4 160 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PSIP1O75475 530 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CATP04040 527 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 THEGLP0DJG4 465 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 FNTBP49356 437 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 SEC24CP53992 1094 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 DMWDQ09019 674 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 LRP8Q14114 963 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 NFE2L1Q14494 772 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CFAP157Q5JU67 520 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 WDR45BQ5MNZ6 344 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 LRRC34Q8IZ02 419 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CNDP1Q96KN2 507 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 GATA5Q9BWX5 397 aaPredicted RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PITPNM3Q9BZ71 974 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 CARS2Q9HA77 564 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 SLC23A2Q9UGH3 650 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 EIF2B4Q9UI10 523 aaKnown RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 ADAMTS6Q9UKP5 1117 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 PCYT1BQ9Y5K3 369 aaPredicted RBP17.65■□□□□ 0.42
CCDC7-203ENST00000362006 DGKBQ9Y6T7 804 aa17.65■□□□□ 0.42
CCDC7-203ENST00000362006 NEMP2A6NFY4 417 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 FFAR2O15552 330 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 NPHS1O60500 1241 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 SNNO75324 88 aaPredicted RBP17.64■□□□□ 0.41
CCDC7-203ENST00000362006 MAP4P27816 1152 aaKnown RBP17.64■□□□□ 0.41
CCDC7-203ENST00000362006 GNPDA1P46926 289 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 RPIAP49247 311 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 CLCNKAP51800 687 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 NAGLUP54802 743 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 AP1S2P56377 157 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.41
CCDC7-203ENST00000362006 HERVK_113P63132 956 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 ABRQ12979 859 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 PFKFB4Q16877 469 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 LPCAT2Q7L5N7 544 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 CPLX4Q7Z7G2 160 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 LILRA3Q8N6C8 439 aaPredicted RBP17.64■□□□□ 0.41
CCDC7-203ENST00000362006 PTGR2Q8N8N7 351 aaPredicted RBP17.64■□□□□ 0.41
CCDC7-203ENST00000362006 DTWD2Q8NBA8 298 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 PDPRQ8NCN5 879 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 DNASE2BQ8WZ79 361 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 OR1E3Q8WZA6 343 aa17.64■□□□□ 0.41
CCDC7-203ENST00000362006 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms