RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 C8orf4Q9NR00 106 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 ADGRB1O14514 1584 aa18.14■□□□□ 0.49
SHANK1-202ENST00000359082 MPZL2O60487 215 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 APOC1P02654 83 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CHRM5P08912 532 aaPredicted RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 IDH3AP50213 366 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 NRLP54845 237 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 VLDLRP98155 873 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 ZNF567Q8N184 647 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CBR4Q8N4T8 237 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 FAM83DQ9H4H8 585 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 MAN2B2Q9Y2E5 1009 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 AIREO43918 545 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 AP1S2P56377 157 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 TSPAN5P62079 268 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 ARL13AQ5H913 290 aaPredicted RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 ABHD15Q6UXT9 468 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 RFKQ969G6 155 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 TREHO43280 583 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CDC40O60508 579 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 TRMUO75648 421 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CST3P01034 146 aaPredicted RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SELPP16109 830 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 ZNF823P16415 610 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CA9Q16790 459 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 ALG1LQ6GMV1 187 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 OGFOD2Q6N063 350 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 KCTD8Q6ZWB6 473 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SPOCK2Q92563 424 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 KLK6Q92876 244 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SLC35G5Q96KT7 338 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 IFT27Q9BW83 186 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 PNPLA8Q9NP80 782 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SIRPGQ9P1W8 387 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 CDH7Q9ULB5 785 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 A0A1W2PQ67 120 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 PDPK1O15530 556 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 B3GALT2O43825 422 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 PUM1Q14671 1186 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 PIWIL1Q96J94 861 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 FKBP14Q9NWM8 211 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 KLRG2A4D1S0 409 aaPredicted RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 LSM1O15116 133 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 AVPR1BP47901 424 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 GANABQ14697 944 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SLC51AQ86UW1 340 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 TMEM192Q8IY95 271 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 VGLL2Q8N8G2 317 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 C11orf65Q8NCR3 313 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 UPF1Q92900 1129 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 RBM18Q96H35 190 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 GPATCH1Q9BRR8 931 aaKnown RBP18.13■□□□□ 0.49
SHANK1-202ENST00000359082 FEM1AQ9BSK4 669 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 SRMSQ9H3Y6 488 aa18.13■□□□□ 0.49
SHANK1-202ENST00000359082 TEX46H3BTG2 121 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 CXCR6O00574 342 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 RTP1P59025 263 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 PRR5P85299 388 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 CDKL1Q00532 357 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 FRMD7Q6ZUT3 714 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 MFSD3Q96ES6 412 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 POLR3BQ9NW08 1133 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 LGR5O75473 907 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 OR7A10O76100 309 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 GADD45GO95257 159 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 CTSOP43234 321 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 KHKP50053 298 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 VSTM1Q6UX27 236 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 KCT2Q8NC54 265 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 SRFBP1Q8NEF9 429 aaKnown RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ARMC5Q96C12 935 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 COQ8BQ96D53 544 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 TELO2Q9Y4R8 837 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ARL5AQ9Y689 179 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 SH3D21A4FU49 640 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 CCNE2O96020 404 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ACVR2AP27037 513 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 P2RY8Q86VZ1 359 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 RIPOR3Q96MK2 946 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 UPB1Q9UBR1 384 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 FKBPLQ9UIM3 349 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 B4GALT4O60513 344 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 PRH1P02810 166 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 HOXA10P31260 410 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 CDKN2BP42772 138 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 GRK6P43250 576 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 GNA12Q03113 381 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 LCP2Q13094 533 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 PITRM1Q5JRX3 1037 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ECHDC2Q86YB7 292 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 SPERTQ8NA61 448 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 MRIQ9BWK5 157 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ABLIM1O14639 778 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 TSPAN1O60635 241 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 MT-CYBP00156 380 aaPredicted RBP18.12■□□□□ 0.49
SHANK1-202ENST00000359082 ECHS1P30084 290 aa18.12■□□□□ 0.49
SHANK1-202ENST00000359082 FLT3LGP49771 235 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms