RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 C9JVG2 144 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 SDHDO14521 159 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 INPP4BO15327 924 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 NPHS1O60500 1241 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 PGM3O95394 542 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 PSMG1O95456 288 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ATP5BP06576 529 aaKnown RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 GDF5P43026 501 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF234Q14588 700 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ARHGAP24Q8N264 748 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CFAP61Q8NHU2 1237 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 FOXJ1Q92949 421 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CNDP1Q96KN2 507 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF641Q96N77 438 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 BTBD10Q9BSF8 475 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 TFB2MQ9H5Q4 396 aaKnown RBP12.44□□□□□ -0.42
GGPS1-202ENST00000358966 CD274Q9NZQ7 290 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
GGPS1-202ENST00000358966 TRBV5-4A0A0C4DH59 114 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 TMEM202A6NGA9 273 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 K7ESM1 405 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 AKT1P31749 480 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 ARL1P40616 181 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 SLC26A3P40879 764 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 RASSF2P50749 326 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 RALGDSQ12967 914 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 TGFBIQ15582 683 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 GPRC6AQ5T6X5 926 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 VRK3Q8IV63 474 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 LSM14AQ8ND56 463 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 OR52B6Q8NGF0 335 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 GIPC3Q8TF64 312 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 STARD8Q92502 1023 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 LENG8Q96PV6 779 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 RIOK2Q9BVS4 552 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 NSUN3Q9H649 340 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 POPDC3Q9HBV1 291 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 ZFP14Q9HCL3 533 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 QPCTLQ9NXS2 382 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 FAF1Q9UNN5 650 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 CDYLQ9Y232 598 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 DHRS7Q9Y394 339 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 TRAF6Q9Y4K3 522 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 UPK3BL1B0FP48 263 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 UPK3BL2E5RIL1 263 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 GSC2O15499 205 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 SPINT1O43278 529 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 NFATC1O95644 943 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 OPRD1P41143 372 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 IL12RB1P42701 662 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 NME5P56597 212 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 HSPA14Q0VDF9 509 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 BOP1Q14137 746 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 DMC1Q14565 340 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 SBSNQ6UWP8 590 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 GPSM1Q86YR5 675 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 MMAAQ8IVH4 418 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 SLC22A9Q8IVM8 553 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 LILRA3Q8N6C8 439 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 SKA2Q8WVK7 121 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 MRPL38Q96DV4 380 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 LATS2Q9NRM7 1088 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
GGPS1-202ENST00000358966 TAGLN3Q9UI15 199 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 DNAJC15Q9Y5T4 150 aa12.43□□□□□ -0.42
GGPS1-202ENST00000358966 F8W8V4 182 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 PFDN6O15212 129 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 TCF3P15923 654 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 PCSK6P29122 969 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 GJA4P35212 333 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 ACADVLP49748 655 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 SPIDRQ14159 915 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 ZNF805Q5CZA5 627 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 NKAPQ8N5F7 415 aaKnown RBP12.42□□□□□ -0.42
GGPS1-202ENST00000358966 OR9I1Q8NGQ6 314 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 RHEBL1Q8TAI7 183 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 L3HYPDHQ96EM0 354 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 COPS8Q99627 209 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 GDF15Q99988 308 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 SLC2A11Q9BYW1 496 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 CLEC1BQ9P126 229 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 GNPTGQ9UJJ9 305 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 PPIL1Q9Y3C6 166 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 AOC1P19801 751 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 GDI1P31150 447 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 CCR7P32248 378 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 CLCQ05315 142 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 ASPHQ12797 758 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 KLF10Q13118 480 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 ADRM1Q16186 407 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms