RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PSAPL1Q6NUJ1 521 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 CHST15Q7LFX5 561 aaPredicted RBP12.07□□□□□ -0.48
COL20A1-201ENST00000358894 OR4F6Q8NGB9 312 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 EBPLQ9BY08 206 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 BRD9Q9H8M2 597 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 GMPPBQ9Y5P6 360 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
COL20A1-201ENST00000358894 TRAV19A0A0A6YYK7 116 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 HAS3O00219 553 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 MTX2O75431 263 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 FTH1P02794 183 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 GJA1P17302 382 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 FOXA1P55317 472 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 MRPL28Q13084 256 aaKnown RBP12.07□□□□□ -0.48
COL20A1-201ENST00000358894 KDELC1Q6UW63 502 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SLC15A3Q8IY34 581 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 AADATQ8N5Z0 425 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 TRPV3Q8NET8 790 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 APOL4Q9BPW4 351 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 DERL2Q9GZP9 239 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 CSNK1G1Q9HCP0 422 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 TPRKBQ9Y3C4 175 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 NEDD8-MDP1E9PL57 170 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 EPOP01588 193 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 IFNA8P32881 189 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CDKN1CP49918 316 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CYP4F8P98187 520 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 SEMA3BQ13214 749 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PGM2L1Q6PCE3 622 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CLEC14AQ86T13 490 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 UBASH3BQ8TF42 649 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 OSGEPL1Q9H4B0 414 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PLAC1Q9HBJ0 212 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 KCTD5Q9NXV2 234 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ACTR3BQ9P1U1 418 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PADI4Q9UM07 663 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 H3BNX3 289 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CLDN7O95471 211 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CLDN9O95484 217 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ZNF12P17014 697 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 GPC1P35052 558 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CAPGP40121 348 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 EPS8Q12929 822 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 RFTN1Q14699 578 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 DOK6Q6PKX4 331 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 HID1Q8IV36 788 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 REXO5Q96IC2 774 aaKnown RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PSKH2Q96QS6 385 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 RASSF1Q9NS23 344 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 SQORQ9Y6N5 450 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 NOTOA8MTQ0 251 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 M0QZQ0 153 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CYP11A1P05108 521 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 KIR3DL1P43629 444 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 AP1S1P61966 158 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 SETMARQ53H47 684 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 KCTD8Q6ZWB6 473 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 OR7A2PQ8NGA2 310 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 OR52B6Q8NGF0 335 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 MTERF3Q96E29 417 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ITCHQ96J02 903 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 CGREF1Q99674 301 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ACAT2Q9BWD1 397 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 GSTO2Q9H4Y5 243 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 TREX1Q9NSU2 369 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 ADPRHL2Q9NX46 363 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 KIAA1522Q9P206 1035 aaPredicted RBP12.06□□□□□ -0.48
COL20A1-201ENST00000358894 PCDHGA7Q9Y5G6 932 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 SIPA1L1O43166 1804 aa12.06□□□□□ -0.48
COL20A1-201ENST00000358894 FBP2O00757 339 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 UMPSP11172 480 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 POLR2EP19388 210 aaKnown RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ALDH4A1P30038 563 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ARCN1P48444 511 aaKnown RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ACADVLP49748 655 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 RTP2Q5QGT7 225 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 DNAJB7Q7Z6W7 309 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 SYVN1Q86TM6 617 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 LSMEM2Q8N112 164 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 STX19Q8N4C7 294 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 OR13J1Q8NGT2 312 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 PLD4Q96BZ4 506 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 FANCEQ9HB96 536 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 SPO11Q9Y5K1 396 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 LOC100506127A0A0U1RQW1 187 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 SEC24AO95486 1093 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 FUT4P22083 530 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 STT3AP46977 705 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 MCCD1P59942 119 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 RUNX1T1Q06455 604 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms