RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 WDR12Q9GZL7 423 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ASB8Q9H765 288 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 OLA1Q9NTK5 396 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FAM118AQ9NWS6 357 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 IMPAD1Q9NX62 359 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 DNAJB9Q9UBS3 223 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PADI3Q9ULW8 664 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 GPR45Q9Y5Y3 372 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FER1L6Q2WGJ9 1857 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 WDR81Q562E7 1941 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SNPHO15079 494 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 LSM1O15116 133 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ASNA1O43681 348 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FDXRP22570 491 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FSHRP23945 695 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 NUDT6P53370 316 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 RHOAP61586 193 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FAM189BP81408 668 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 UBE3AQ05086 875 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 HSPA14Q0VDF9 509 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 RFTN2Q52LD8 501 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PYCR3Q53H96 274 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SPOUT1Q5T280 376 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 KANK2Q63ZY3 851 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 KIAA1841Q6NSI8 718 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 GPR153Q6NV75 609 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ZDHHC21Q8IVQ6 265 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TTC9BQ8N6N2 239 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 NDNFQ8TB73 568 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PYCR2Q96C36 320 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SH3GL1Q99961 368 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 EBPLQ9BY08 206 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 CIPCQ9C0C6 399 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FBXO44Q9H4M3 255 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TLR8Q9NR97 1041 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 POLR3BQ9NW08 1133 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ARL15Q9NXU5 204 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 VAPAQ9P0L0 249 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ERGIC3Q9Y282 383 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 MICAL3Q7RTP6 2002 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 LDB2O43679 373 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 OTCP00480 354 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ENO2P09104 434 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 DCKP27707 260 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 HPCAL1P37235 193 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PIGAP37287 484 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TTPAP49638 278 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TMBIM6P55061 237 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ERVPABLB-1P60509 514 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 BOP1Q14137 746 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TAF1CQ15572 869 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 CCDC85BQ15834 202 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ARMC12Q5T9G4 340 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 LETMD1Q6P1Q0 360 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 AGMOQ6ZNB7 445 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 NECAB2Q7Z6G3 386 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM132CQ8N3T6 1108 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 STX19Q8N4C7 294 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SETD9Q8NE22 299 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PIK3C3Q8NEB9 887 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 OR2T11Q8NH01 316 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 RSPH1Q8WYR4 309 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ZFYVE19Q96K21 471 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 APOLD1Q96LR9 279 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF599Q96NL3 588 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 APOL4Q9BPW4 351 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 ADGRE3Q9BY15 652 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 KRT84Q9NSB2 600 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 FARSBQ9NSD9 589 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TRMT13Q9NUP7 481 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM9Q9P0T7 183 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SCHIP1Q9P0W5 487 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 AGO1Q9UL18 857 aaKnown RBP6.47□□□□□ -1.37
CSDE1-203ENST00000358528 VPS9D1Q9Y2B5 631 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHB5Q9Y5E4 795 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHA9Q9Y5H5 950 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 SPO11Q9Y5K1 396 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 RAI2Q9Y5P3 530 aa6.47□□□□□ -1.37
CSDE1-203ENST00000358528 RFXANKO14593 260 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 TFECO14948 347 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-203ENST00000358528 TULP3O75386 442 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 HIST1H2AGP0C0S8 130 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-203ENST00000358528 CD36P16671 472 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 HOXB8P17481 243 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-203ENST00000358528 HIST1H2ADP20671 130 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 DNAJB1P25685 340 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 IL12AP29459 219 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 PBX3P40426 434 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 ABRAXAS2Q15018 415 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 DOK6Q6PKX4 331 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 TMC5Q6UXY8 1006 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 MBOAT1Q6ZNC8 495 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 SCD5Q86SK9 330 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 GATAD2AQ86YP4 633 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 SLC22A15Q8IZD6 547 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 CLIP4Q8N3C7 705 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 TRUB1Q8WWH5 349 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms