RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CPNE5Q9HCH3 593 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 KCNE2Q9Y6J6 123 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 C4AP0C0L4 1744 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 C4BP0C0L5 1744 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PIP5K1BO14986 540 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 XPNPEP2O43895 674 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF280DQ6N043 979 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF767PQ75MW2 155 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ADGRD2Q7Z7M1 963 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SEMA3CQ99985 751 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF350Q9GZX5 532 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SLA2Q9H6Q3 261 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 FKBP7Q9Y680 259 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CHURC1-FNTBB4DL54 471 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 KRT33AO76009 404 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 PRKACAP17612 351 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 KLRC2P26717 231 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 TLX1P31314 330 aaPredicted RBP8.65□□□□□ -1.03
COL6A6-201ENST00000358511 GTF2H2Q13888 395 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 CTXN3Q4LDR2 81 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ING5Q8WYH8 240 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.03
COL6A6-201ENST00000358511 MARCH2Q9P0N8 246 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 PIM2Q9P1W9 311 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 POFUT2Q9Y2G5 429 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ANXA2P2A6NMY6 339 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 WNT7AO00755 349 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ANXA2P07355 339 aaKnown RBP8.65□□□□□ -1.03
COL6A6-201ENST00000358511 SHMT1P34896 483 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 GABARAPL2P60520 117 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ERVK-8P63133 956 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 SYT16Q17RD7 645 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 OR2T5Q6IEZ7 315 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 STYK1Q6J9G0 422 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 ALDH16A1Q8IZ83 802 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 OR2T29Q8NH02 315 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 EXOC2Q96KP1 924 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 HERC2P3Q9BVR0 1158 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.03
COL6A6-201ENST00000358511 UXTQ9UBK9 157 aaPredicted RBP8.65□□□□□ -1.03
COL6A6-201ENST00000358511 TRPS1Q9UHF7 1281 aa8.65□□□□□ -1.03
COL6A6-201ENST00000358511 PER2O15055 1255 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 AMHP03971 560 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 GSTT2P0CG29 244 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PDHA2P29803 388 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PRKAG1P54619 331 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 BACE1P56817 501 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ACOX1Q15067 660 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ASRGL1Q7L266 308 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NIPA2Q8N8Q9 360 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CPXM1Q96SM3 734 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NOCTQ9UK39 431 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NUP188Q5SRE5 1749 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 GNAO1P09471 354 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 AXLP30530 894 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CSTF2P33240 577 aaKnown RBP eCLIP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SULT2A1Q06520 285 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 IKBKEQ14164 716 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MYLK3Q32MK0 819 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 COLGALT2Q8IYK4 626 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CFAP206Q8IYR0 622 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CLCC1Q96S66 551 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 DUSP16Q9BY84 665 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FAM124BQ9H5Z6 455 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TESMINQ9Y4I5 508 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PTPRJQ12913 1337 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SNAPC2Q13487 334 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 RAPSNQ13702 412 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 GRM3Q14832 879 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 DPY19L1Q2PZI1 675 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 C11orf91Q3C1V1 193 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 STRADAQ7RTN6 431 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM192Q8IY95 271 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 LGI2Q8N0V4 545 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PIGXQ8TBF5 258 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ACER1Q8TDN7 264 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TTYH2Q9BSA4 534 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 C2orf49Q9BVC5 232 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MFSD1Q9H3U5 465 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NUDT15Q9NV35 164 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ZNHIT2Q9UHR6 403 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF639Q9UID6 485 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF14P17017 642 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TXNL4AP83876 142 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SHQ1Q6PI26 577 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PAMR1Q6UXH9 720 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FRRS1Q6ZNA5 592 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CEP295NLQ96MC4 621 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TSSK3Q96PN8 268 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CASTOR2A6NHX0 329 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 C9JVG2 144 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms