RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 RIF1Q5UIP0 2472 aaKnown RBP14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ZNF292O60281 2723 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 TRBV23OR9-2A0A075B6M9 112 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 OR52A4PA6NMU1 304 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 C4orf47A7E2U8 309 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 B4DGG1 531 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 TPP1O14773 563 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 GFRA3O60609 400 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 CDH16O75309 829 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 KRT37O76014 449 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
CCNE1-202ENST00000357943 F3P13726 295 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 GMPRP36959 345 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 RAB10P61026 200 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ZNF844Q08AG5 666 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 TMED2Q15363 201 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 TTLL9Q3SXZ7 439 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 C6orf132Q5T0Z8 1188 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 LVRNQ6Q4G3 990 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ABRAXAS1Q6UWZ7 409 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 DBX2Q6ZNG2 339 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 SLC22A15Q8IZD6 547 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ZDHHC1Q8WTX9 485 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 MZB1Q8WU39 189 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 EEF1AKMT1Q8WVE0 214 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 GLMNQ92990 594 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ROPN1BQ9BZX4 212 aaPredicted RBP14.55□□□□□ -0.08
CCNE1-202ENST00000357943 ROPN1Q9HAT0 212 aaPredicted RBP14.55□□□□□ -0.08
CCNE1-202ENST00000357943 GPAMQ9HCL2 828 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 SNX15Q9NRS6 342 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 NLGN3Q9NZ94 848 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 SIRPGQ9P1W8 387 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 BTBD3Q9Y2F9 522 aa14.55□□□□□ -0.08
CCNE1-202ENST00000357943 CFAP20Q9Y6A4 193 aaKnown RBP14.55□□□□□ -0.08
CCNE1-202ENST00000357943 IQANK1A0A1B0GTG1 560 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 FOXO6A8MYZ6 492 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 TRIM38O00635 465 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 FOXD2O60548 495 aaPredicted RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 WISP3O95389 354 aaPredicted RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 SLC35G4P0C7Q5 338 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 ZNF37AP17032 561 aaPredicted RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 CSRP3P50461 194 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 PLOD1Q02809 727 aaPredicted RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 RASA2Q15283 850 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 LGSNQ5TDP6 509 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 AGAP9Q5VTM2 703 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 CAPRIN2Q6IMN6 1127 aaKnown RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 IYDQ6PHW0 289 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 WASH2PQ6VEQ5 465 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 RAPH1Q70E73 1250 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 EID2Q8N6I1 236 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 OR4C6Q8NH72 309 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 ANKRD49Q8WVL7 239 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 ISL2Q96A47 359 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 TSPAN17Q96FV3 270 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 RMDN2Q96LZ7 410 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 INSM2Q96T92 566 aaPredicted RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 TMEM109Q9BVC6 243 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 POPDC3Q9HBV1 291 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 WASH6PQ9NQA3 447 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 RUVBL2Q9Y230 463 aaKnown RBP14.54□□□□□ -0.08
CCNE1-202ENST00000357943 PCDHGB2Q9Y5G2 931 aa14.54□□□□□ -0.08
CCNE1-202ENST00000357943 MAP2K7O14733 419 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 NOBOXO60393 691 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 TSPAN12O95859 305 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SLC35E2BP0CK96 405 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 CD59P13987 128 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 ACADLP28330 430 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 TYK2P29597 1187 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SERPINB8P50452 374 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SLC14A1Q13336 389 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SUZ12Q15022 739 aaKnown RBP14.53□□□□□ -0.08
CCNE1-202ENST00000357943 CEP85LQ5SZL2 805 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 DUS1LQ6P1R4 473 aaKnown RBP14.53□□□□□ -0.08
CCNE1-202ENST00000357943 HDXQ7Z353 690 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 PIWIL4Q7Z3Z4 852 aaKnown RBP14.53□□□□□ -0.08
CCNE1-202ENST00000357943 PDZD3Q86UT5 571 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SLC37A2Q8TED4 501 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 SKA2Q8WVK7 121 aaPredicted RBP14.53□□□□□ -0.08
CCNE1-202ENST00000357943 MTBPQ96DY7 904 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 C12orf66Q96MD2 445 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 DUSP23Q9BVJ7 150 aa14.53□□□□□ -0.08
CCNE1-202ENST00000357943 PRAMEF33A0A0G2JMD5 474 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.52□□□□□ -0.08
CCNE1-202ENST00000357943 IFRD1O00458 451 aaPredicted RBP14.52□□□□□ -0.08
CCNE1-202ENST00000357943 SIGLEC6O43699 453 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 RFPL1O75677 317 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 SASH3O75995 380 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 C2P06681 752 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 CBSLP0DN79 551 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 ALPPL2P10696 532 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 MYF5P13349 255 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 CRABP2P29373 138 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 CBSP35520 551 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 HALP42357 657 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 MAGEA12P43365 314 aa14.52□□□□□ -0.08
CCNE1-202ENST00000357943 MAZP56270 477 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms