RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FGF10O15520 208 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CACNG3O60359 315 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SEC14L2O76054 403 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR4F21O95013 312 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CPNE6O95741 557 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 NTRK1P04629 796 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 PIK3CGP48736 1102 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATP4BP51164 291 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 ILF2Q12905 390 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 IHHQ14623 411 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 LAPTM4AQ15012 233 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 DUSP28Q4G0W2 176 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 ALFQ53S48 1182 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SGO1Q5FBB7 561 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 KIAA1841Q6NSI8 718 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 STAG3L4Q8TBR4 150 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 JPH3Q8WXH2 748 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 GLMNQ92990 594 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SMIM14Q96QK8 99 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 UQCC2Q9BRT2 126 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 FUNDC2Q9BWH2 189 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRM3Q9NNZ6 103 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDH9Q9ULB4 789 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 PPP2R3BQ9Y5P8 575 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR45Q9Y5Y3 372 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLR2AP24928 1970 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 A0A1W2PQ72 361 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 A8MX80 341 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 F8W810 466 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC7A4O43246 635 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 XPNPEP2O43895 674 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TBC1D4O60343 1298 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ECI2O75521 394 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TBX18O95935 607 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 CST1P01037 141 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 CYP4B1P13584 511 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FOSL1P15407 271 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 HRH2P25021 359 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR3A3P47888 321 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC9A3P48764 834 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 NR6A1Q15406 480 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM98BQ52LJ0 330 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM205BPQ63HN1 556 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 KANK2Q63ZY3 851 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM122CQ6P4D5 195 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 KDELC1Q6UW63 502 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LINC00299Q6ZSB3 139 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALNT5Q7Z7M9 940 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADAMTSL2Q86TH1 951 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SYVN1Q86TM6 617 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PHYKPLQ8IUZ5 450 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALNT12Q8IXK2 581 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RTL3Q8N8U3 475 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF555Q8NEP9 628 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR52B6Q8NGF0 335 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PSMA8Q8TAA3 256 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 STON2Q8WXE9 905 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 VMP1Q96GC9 406 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR21Q99679 349 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SYTL2Q9HCH5 934 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 CATSPERZQ9NTU4 200 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADPRHL2Q9NX46 363 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 EIF2B4Q9UI10 523 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZMYM5Q9UJ78 669 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 UTS2RQ9UKP6 389 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PCDHB3Q9Y5E6 796 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ACTL7AQ9Y615 435 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LINC00854A0A1B0GVQ3 168 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 M0R3G1 203 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 NDUFS3O75489 264 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 INMTO95050 263 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 IL12AP29459 219 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 NUDT1P36639 197 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PIGAP37287 484 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FPGSQ05932 587 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 EFEMP1Q12805 493 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRKG2Q13237 762 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 DAG1Q14118 895 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RCAN2Q14206 197 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF235Q14590 738 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MFSD10Q14728 455 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZFP69Q49AA0 526 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PXDC1Q5TGL8 231 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 IL27RAQ6UWB1 636 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ENPP6Q6UWR7 440 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms